RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 VPS11Q9H270 941 aa14.11□□□□□ -0.15
SHMT1P1-201ENST00000419974 FAM96AQ9H5X1 160 aa14.11□□□□□ -0.15
SHMT1P1-201ENST00000419974 TRIM39Q9HCM9 518 aa14.11□□□□□ -0.15
SHMT1P1-201ENST00000419974 NKIRAS1Q9NYS0 192 aa14.11□□□□□ -0.15
SHMT1P1-201ENST00000419974 DHRS7Q9Y394 339 aa14.11□□□□□ -0.15
SHMT1P1-201ENST00000419974 CCDC163A0A0D9SF12 145 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 IGLON5A6NGN9 336 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 FOXO6A8MYZ6 492 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 KPNA5O15131 536 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 VPS26AO75436 327 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 APBB3O95704 486 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 MDH1P40925 334 aaKnown RBP14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 CCR5P51681 352 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 CLCN7P51798 805 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 KPNA2P52292 529 aaKnown RBP14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 LRRC14Q15048 493 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 WSCD2Q2TBF2 565 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 CDHR3Q6ZTQ4 885 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 CMC1Q7Z7K0 106 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 SLC41A1Q8IVJ1 513 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 NKAPQ8N5F7 415 aaKnown RBP14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 TP53I13Q8NBR0 393 aaPredicted RBP14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 TSTD1Q8NFU3 115 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 TCP10LQ8TDR4 215 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 ATXN7L3BQ96GX2 97 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 LINC00615Q96LM1 132 aaPredicted RBP14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 GPR78Q96P69 363 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 FOXQ1Q9C009 403 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 CAB39LQ9H9S4 337 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 GPAMQ9HCL2 828 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 ADAM21Q9UKJ8 722 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 GPR34Q9UPC5 381 aa14.1□□□□□ -0.15
SHMT1P1-201ENST00000419974 A0A1W2PQU0 124 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 UBA6A0AVT1 1052 aaPredicted RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 BIRC5O15392 142 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 GPR39O43194 453 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 MAGEC1O60732 1142 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 SHOX2O60902 331 aaPredicted RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 RNGTTO60942 597 aaKnown RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 PCDH8O95206 1070 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 OR56A5P0C7T3 313 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 CBSLP0DN79 551 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 ZNF37AP17032 561 aaPredicted RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 FMO4P31512 558 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 CBSP35520 551 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 SGCGQ13326 291 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 FGL2Q14314 439 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 GBX1Q14549 363 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 ACAP2Q15057 778 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 SMAD1Q15797 465 aaKnown RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 FAM83EQ2M2I3 478 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 BCL7AQ4VC05 210 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 AGAP9Q5VTM2 703 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 LRRC8EQ6NSJ5 796 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 RGS9BPQ6ZS82 235 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 TBC1D1Q86TI0 1168 aaPredicted RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 CENPLQ8N0S6 344 aaPredicted RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 TMEM151AQ8N4L1 468 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 RHEBL1Q8TAI7 183 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 FAM174AQ8TBP5 190 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 RDH11Q8TC12 318 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 GANCQ8TET4 914 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 DCUN1D1Q96GG9 259 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 NDNQ99608 321 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 KLF6Q99612 283 aaPredicted RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 BOCQ9BWV1 1114 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 TSSK1BQ9BXA7 367 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 DERL2Q9GZP9 239 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 SLC6A17Q9H1V8 727 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 KCNK9Q9NPC2 374 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 SPATS2LQ9NUQ6 558 aaKnown RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 PCMTD2Q9NV79 361 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 INTS9Q9NV88 658 aaKnown RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 CD84Q9UIB8 345 aa14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 DNMT3AQ9Y6K1 912 aaPredicted RBP14.09□□□□□ -0.15
SHMT1P1-201ENST00000419974 C17orf113A0A1B0GUU1 675 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 TARM1B6A8C7 271 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 GOLGA8RI6L899 631 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 SGTAO43765 313 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 PLIN3O60664 434 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 RHOBTB1O94844 696 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 SLC25A14O95258 325 aaPredicted RBP14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 LTA4HP09960 611 aaKnown RBP14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 CHN1P15882 459 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 ABCG1P45844 678 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 GPR1P46091 355 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 PRLHRP49683 370 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 CCR3P51677 355 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 WDR4P57081 412 aaKnown RBP14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 ATP6V0D1P61421 351 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 TMEM115Q12893 351 aaPredicted RBP14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 ANGPT1Q15389 498 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 PPM1JQ5JR12 505 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 SEL1L3Q68CR1 1132 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 KIAA1324Q6UXG2 1013 aaKnown RBP14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 MICALCLQ6ZW33 695 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 RAPH1Q70E73 1250 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 RAB3IL1Q8TBN0 382 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 CD200R1Q8TD46 325 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms