RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 HIST2H2ACQ16777 129 aaPredicted RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 SLC5A9Q2M3M2 681 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 C9orf50Q5SZB4 431 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 HIST2H2AA3Q6FI13 130 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 ERN2Q76MJ5 926 aaKnown RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 ELMO1Q92556 727 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 EMCNQ9ULC0 261 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 SLC28A1O00337 649 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 KAT7O95251 611 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 LINC00271P0C7V0 271 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 UROSP10746 265 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 ALOX15P16050 662 aaPredicted RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 EPB42P16452 691 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 BPIP17213 487 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 KELP23276 732 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 EEF1DP29692 281 aaKnown RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 PDCD2Q16342 344 aaPredicted RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 FRMD7Q6ZUT3 714 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 CYP2U1Q7Z449 544 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 LDB1Q86U70 411 aaPredicted RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 CEP97Q8IW35 865 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 CENPLQ8N0S6 344 aaPredicted RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 PLD6Q8N2A8 252 aaKnown RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 FITM2Q8N6M3 262 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 BEND7Q8N7W2 519 aaPredicted RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 SNX31Q8N9S9 440 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 CFAP61Q8NHU2 1237 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 NUS1Q96E22 293 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 ABHD8Q96I13 439 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 SLC25A23Q9BV35 468 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 C1QTNF1Q9BXJ1 281 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 CLDND1Q9NY35 253 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 UTP6Q9NYH9 597 aaKnown RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 SLCO3A1Q9UIG8 710 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 KIAA0100Q14667 2235 aaKnown RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 IFRD1O00458 451 aaPredicted RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 CCL22O00626 93 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 KCNJ13O60928 360 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 TARSP26639 723 aaKnown RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 HSD17B2P37059 387 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 ATP4BP51164 291 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 GSTA3Q16772 222 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 FBXO43Q4G163 708 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 EPGNQ6UW88 154 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 MILR1Q7Z6M3 343 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 NLRP8Q86W28 1048 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 LONP2Q86WA8 852 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 OR2A12Q8NGT7 310 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 RIN3Q8TB24 985 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 WFDC5Q8TCV5 224 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 CYB5D2Q8WUJ1 264 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 STARD8Q92502 1023 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 UBE2E3Q969T4 207 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 PPP3R2Q96LZ3 170 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 OLFM1Q99784 485 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 P2RY13Q9BPV8 354 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 PHPT1Q9NRX4 125 aaPredicted RBP8.3□□□□□ -1.08
USP54-203ENST00000418501 KLC4Q9NSK0 619 aa8.3□□□□□ -1.08
USP54-203ENST00000418501 BBIP1A8MTZ0 92 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 LIN7AO14910 233 aaPredicted RBP8.29□□□□□ -1.08
USP54-203ENST00000418501 RGS14O43566 566 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 VEGFDO43915 354 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 MOSPD3O75425 235 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 PCDH8O95206 1070 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 PRKCGP05129 697 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 MYOGP15173 224 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 C5AR1P21730 350 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 GABRB3P28472 473 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 BMP8BP34820 402 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 VIPR2P41587 438 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 NUMBP49757 651 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 IDH3AP50213 366 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 CLCQ05315 142 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 C10orf62Q5T681 223 aaPredicted RBP8.29□□□□□ -1.08
USP54-203ENST00000418501 CACHD1Q5VU97 1274 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 RAET1GQ6H3X3 334 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 ADIPOR2Q86V24 386 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 POP5Q969H6 163 aaKnown RBP8.29□□□□□ -1.08
USP54-203ENST00000418501 C12orf65Q9H3J6 166 aaKnown RBP8.29□□□□□ -1.08
USP54-203ENST00000418501 RDH14Q9HBH5 336 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 SLC40A1Q9NP59 571 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 PCDH12Q9NPG4 1184 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 PNPOQ9NVS9 261 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 ARL15Q9NXU5 204 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 HAO1Q9UJM8 370 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 INTS6Q9UL03 887 aaKnown RBP8.29□□□□□ -1.08
USP54-203ENST00000418501 NPEPPSL1A6NEC2 478 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 TTC34A8MYJ7 566 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 GPR89AB7ZAQ6 455 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 MATN2O00339 956 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 LYPLA1O75608 230 aaPredicted RBP8.29□□□□□ -1.08
USP54-203ENST00000418501 WFS1O76024 890 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 WDR47O94967 919 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 ARHGEF15O94989 841 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 GPR89BP0CG08 455 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 CCND1P24385 295 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 GALNTL6Q49A17 601 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 TCEAL5Q5H9L2 206 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 EOGTQ5NDL2 527 aa8.29□□□□□ -1.08
USP54-203ENST00000418501 ZNF678Q5SXM1 525 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms