RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 AMD1P17707 334 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 ARHGAP25P42331 645 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 MC1RQ01726 317 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 SLC14A2Q15849 920 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 RFX6Q8HWS3 928 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 RHOT2Q8IXI1 618 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 SPATA22Q8NHS9 363 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 STARD8Q92502 1023 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 TADA1Q96BN2 335 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 TGM7Q96PF1 710 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 SRPK1Q96SB4 655 aaKnown RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 DNAJC7Q99615 494 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 TIMM29Q9BSF4 260 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 ULBP3Q9BZM4 244 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 POT1Q9NUX5 634 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 OGFRQ9NZT2 677 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 ZNF624Q9P2J8 865 aaPredicted RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 BOD1L1Q8NFC6 3051 aa14.21□□□□□ -0.13
PAF1-202ENST00000416728 A0A0A6YYK5 440 aaPredicted RBP14.21□□□□□ -0.14
PAF1-202ENST00000416728 TOX3O15405 576 aaPredicted RBP14.21□□□□□ -0.14
PAF1-202ENST00000416728 RASSF9O75901 435 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 MT-CYBP00156 380 aaPredicted RBP14.21□□□□□ -0.14
PAF1-202ENST00000416728 TCN2P20062 427 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 SLC19A1P41440 591 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 STAT5AP42229 794 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 DYNLT1P63172 113 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 TRIM14Q14142 442 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 MAP7Q14244 749 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 LRRC38Q5VT99 294 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 B4GALNT4Q76KP1 1039 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 C9orf43Q8TAL5 461 aaPredicted RBP14.21□□□□□ -0.14
PAF1-202ENST00000416728 APOBEC4Q8WW27 367 aaKnown RBP14.21□□□□□ -0.14
PAF1-202ENST00000416728 RNF25Q96BH1 459 aaPredicted RBP14.21□□□□□ -0.14
PAF1-202ENST00000416728 ANP32EQ9BTT0 268 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 GLOD4Q9HC38 313 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 SLC30A1Q9Y6M5 507 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 RPS6KL1Q9Y6S9 549 aa14.21□□□□□ -0.14
PAF1-202ENST00000416728 PMPCBO75439 489 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 BRAFP15056 766 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 VCLP18206 1134 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 IDSP22304 550 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 RPL10P27635 214 aaKnown RBP14.2□□□□□ -0.14
PAF1-202ENST00000416728 OAS2P29728 719 aaKnown RBP14.2□□□□□ -0.14
PAF1-202ENST00000416728 SEPHS1P49903 392 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 GTF2H3Q13889 308 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 DEFB109BQ30KR1 87 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 KHDC1Q4VXA5 237 aaKnown RBP14.2□□□□□ -0.14
PAF1-202ENST00000416728 TEX44Q53QW1 395 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 C16orf46Q6P387 395 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 ABRAXAS1Q6UWZ7 409 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 TRAPPC5Q8IUR0 188 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 ZNF547Q8IVP9 402 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 RHOT1Q8IXI2 618 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 RBM12BQ8IXT5 1001 aaKnown RBP14.2□□□□□ -0.14
PAF1-202ENST00000416728 GDAP1Q8TB36 358 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 CXorf40BQ96DE9 158 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 VPS35Q96QK1 796 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 ZNF768Q9H5H4 540 aaKnown RBP14.2□□□□□ -0.14
PAF1-202ENST00000416728 BPIFA1Q9NP55 256 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 SPTLC3Q9NUV7 552 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 DDX56Q9NY93 547 aaKnown RBP14.2□□□□□ -0.14
PAF1-202ENST00000416728 UBP1Q9NZI7 540 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 SPO11Q9Y5K1 396 aa14.2□□□□□ -0.14
PAF1-202ENST00000416728 ZFC3H1O60293 1989 aaKnown RBP14.19□□□□□ -0.14
PAF1-202ENST00000416728 PRR19A6NJB7 356 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 OR52A4PA6NMU1 304 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 AURKAO14965 403 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 TPM1P09493 284 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 TNNT1P13805 278 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 PTPN3P26045 913 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 SLC1A1P43005 524 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 TNNT3P45378 269 aaPredicted RBP14.19□□□□□ -0.14
PAF1-202ENST00000416728 CAPZBP47756 277 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 LEPRP48357 1165 aaKnown RBP14.19□□□□□ -0.14
PAF1-202ENST00000416728 DRG2P55039 364 aaKnown RBP14.19□□□□□ -0.14
PAF1-202ENST00000416728 SEPT6Q14141 434 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 IL11RAQ14626 422 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 SKIDA1Q1XH10 827 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 ATP13A5Q4VNC0 1218 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 CRTC2Q53ET0 693 aaPredicted RBP14.19□□□□□ -0.14
PAF1-202ENST00000416728 AGAP9Q5VTM2 703 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 C6orf15Q6UXA7 325 aaPredicted RBP14.19□□□□□ -0.14
PAF1-202ENST00000416728 WASH2PQ6VEQ5 465 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 BZW1Q7L1Q6 419 aaKnown RBP14.19□□□□□ -0.14
PAF1-202ENST00000416728 RSC1A1Q92681 617 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 TEKT5Q96M29 485 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 CCDC42Q96M95 316 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 TTC25Q96NG3 672 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 OR6C1Q96RD1 312 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 EPN3Q9H201 632 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 TRABDQ9H4I3 376 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 SLC40A1Q9NP59 571 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 WASH6PQ9NQA3 447 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 ZNF71Q9NQZ8 489 aaPredicted RBP14.19□□□□□ -0.14
PAF1-202ENST00000416728 TRIM10Q9UDY6 481 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 ANAPC2Q9UJX6 822 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 TMPRSS11EQ9UL52 423 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 PCDHB3Q9Y5E6 796 aa14.19□□□□□ -0.14
PAF1-202ENST00000416728 CBFA2T2O43439 604 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 ZNF28P17035 718 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms