RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 NKAIN2Q5VXU1 208 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 C19orf48Q6RUI8 117 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 C11orf96Q7Z7L8 435 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 PIM3Q86V86 326 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 TRAPPC5Q8IUR0 188 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 LSMEM2Q8N112 164 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 RASGEF1AQ8N9B8 481 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 DDHD1Q8NEL9 900 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 WDR36Q8NI36 951 aaKnown RBP14.6□□□□□ -0.07
LIMS4-201ENST00000413601 HNRNPLLQ8WVV9 542 aaKnown RBP14.6□□□□□ -0.07
LIMS4-201ENST00000413601 FGF11Q92914 225 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 LIN37Q96GY3 246 aaPredicted RBP14.6□□□□□ -0.07
LIMS4-201ENST00000413601 PRR11Q96HE9 360 aaPredicted RBP14.6□□□□□ -0.07
LIMS4-201ENST00000413601 TIMM29Q9BSF4 260 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 SEMA6CQ9H3T2 930 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 ASB8Q9H765 288 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 ETNK1Q9HBU6 452 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 KCNK4Q9NYG8 393 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 IGHV1OR21-1A0A087WYE8 117 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 OR2AG2A6NM03 316 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 TMX2-CTNND1H3BSU7 103 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 ZW10O43264 779 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 CEP104O60308 925 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 DXOO77932 396 aaKnown RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 CPNE6O95741 557 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 SLC2A4P14672 509 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 RBMS1P29558 406 aaKnown RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 CCKBRP32239 447 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 EIF2S3P41091 472 aaKnown RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 CTSCP53634 463 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 XIAPP98170 497 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 HHEXQ03014 270 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 ZFP36L1Q07352 338 aaKnown RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 NFATC2Q13469 925 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 POU6F1Q14863 301 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 SEPT7Q16181 437 aaKnown RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 CCNG2Q16589 344 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 PHF19Q5T6S3 580 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 ZNF574Q6ZN55 896 aaPredicted RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 RAB11FIP2Q7L804 512 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 GLIS1Q8NBF1 620 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 SNIP1Q8TAD8 396 aaKnown RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 ZNF578Q96N58 590 aaPredicted RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 SLC46A1Q96NT5 459 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 SLC38A3Q99624 504 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 NUDT22Q9BRQ3 303 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 ZCCHC2Q9C0B9 1178 aaKnown RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 STRADBQ9C0K7 418 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 FAM96AQ9H5X1 160 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 SARS2Q9NP81 518 aaKnown RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 ASCL3Q9NQ33 180 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 SMOXQ9NWM0 555 aa14.59□□□□□ -0.07
LIMS4-201ENST00000413601 SCHIP1Q9P0W5 487 aaPredicted RBP14.59□□□□□ -0.07
LIMS4-201ENST00000413601 A0A087WV48 116 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 KIR2DS5A0A0G2JLQ3 304 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 A0A0G2JNG1 304 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 PRR19A6NJB7 356 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 OR5K4A6NMS3 321 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 KIR2DS3K7RE56 304 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 TNFSF15O95150 251 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 ZSCAN5DPP0CG00 497 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 HGFP14210 728 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 MSH3P20585 1137 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 RPL10P27635 214 aaKnown RBP14.58□□□□□ -0.08
LIMS4-201ENST00000413601 AKT1P31749 480 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 FDFT1P37268 417 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 HADHAP40939 763 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 PPM1FP49593 454 aaPredicted RBP14.58□□□□□ -0.08
LIMS4-201ENST00000413601 DRG2P55039 364 aaKnown RBP14.58□□□□□ -0.08
LIMS4-201ENST00000413601 SEPT6Q14141 434 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 KIR2DS5Q14953 304 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 LONRF2Q1L5Z9 754 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 TMEM220Q6QAJ8 160 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 MICALCLQ6ZW33 695 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 DET1Q7L5Y6 550 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 LINC00523Q86TU6 105 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 SLC9B2Q86UD5 537 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 SLITRK4Q8IW52 837 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 REXO1L1PQ8IX06 675 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 FBXO39Q8N4B4 442 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 CCDC89Q8N998 374 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 OR52K1Q8NGK4 314 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 NAT14Q8WUY8 206 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 DNAJC1Q96KC8 554 aaKnown RBP14.58□□□□□ -0.08
LIMS4-201ENST00000413601 KCNF1Q9H3M0 494 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 CPNE7Q9UBL6 633 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 PCDHGA8Q9Y5G5 932 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 ZZEF1O43149 2961 aa14.58□□□□□ -0.08
LIMS4-201ENST00000413601 ANKRD11Q6UB99 2663 aaPredicted RBP14.58□□□□□ -0.08
LIMS4-201ENST00000413601 CCDC78A2IDD5 438 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 ERI2A8K979 691 aaKnown RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 PDZK1P1A8MUH7 402 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 E7EVH7 732 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 PLD2O14939 933 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 POP7O75817 140 aaKnown RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 HOXB3P14651 431 aaPredicted RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 VCLP18206 1134 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 IDSP22304 550 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 ITPKBP27987 946 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 CSF2RBP32927 897 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms