RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CCDC122Q5T0U0 273 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 AGAP9Q5VTM2 703 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 PDPK2PQ6A1A2 396 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 SASS6Q6UVJ0 657 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 CPNE8Q86YQ8 564 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 RBM12BQ8IXT5 1001 aaKnown RBP11.96□□□□□ -0.49
LIMS2-210ENST00000413578 TRAM1L1Q8N609 369 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 PQLC3Q8N755 202 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 CCHCR1Q8TD31 782 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 LRRN4Q8WUT4 740 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 GLYATL1Q969I3 302 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 HDAC11Q96DB2 347 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 TIMM29Q9BSF4 260 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 ZSCAN5AQ9BUG6 496 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 NUP85Q9BW27 656 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 SPATA16Q9BXB7 569 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 TWSG1Q9GZX9 223 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 OSGEPL1Q9H4B0 414 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 AKIRIN1Q9H9L7 192 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-210ENST00000413578 ZFYVE1Q9HBF4 777 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 LRRC4CQ9HCJ2 640 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 PLEKHB1Q9UF11 243 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-210ENST00000413578 IP6K2Q9UHH9 426 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 LNPEPQ9UIQ6 1025 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 ANAPC7Q9UJX3 599 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 TMPRSS11EQ9UL52 423 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 PADI1Q9ULC6 663 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 TTLL3Q9Y4R7 772 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 DOPEY1Q5JWR5 2465 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 A0A1B0GTH6 734 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 OR52A4PA6NMU1 304 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 KATNA1O75449 491 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 MTA2O94776 668 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 SORBS2O94875 1100 aaKnown RBP11.95□□□□□ -0.5
LIMS2-210ENST00000413578 SLC25A14O95258 325 aaPredicted RBP11.95□□□□□ -0.5
LIMS2-210ENST00000413578 MT-ND3P03897 115 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 RNF224P0DH78 156 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 AMD1P17707 334 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 GNLYP22749 145 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 ZBTB17Q13105 803 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 GPR18Q14330 331 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 INSCQ1MX18 579 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 CACHD1Q5VU97 1274 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 PAPD7Q5XG87 772 aaKnown RBP11.95□□□□□ -0.5
LIMS2-210ENST00000413578 CRTC3Q6UUV7 619 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 TMC3Q7Z5M5 1100 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 LRRTM4Q86VH4 590 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 PPP1R3BQ86XI6 285 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 RASGRP3Q8IV61 690 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 TADA1Q96BN2 335 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 ELMO2Q96JJ3 720 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 RUFY1Q96T51 708 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 ACTL8Q9H568 366 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 HAUS2Q9NVX0 235 aa11.95□□□□□ -0.5
LIMS2-210ENST00000413578 PCDHGA9Q9Y5G4 932 aaKnown RBP11.95□□□□□ -0.5
LIMS2-210ENST00000413578 PIPSLA2A3N6 862 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 KMOO15229 486 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 VEGFDO43915 354 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 MTX2O75431 263 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 RASSF9O75901 435 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 FOLR1P15328 257 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 BPIP17213 487 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 MX2P20592 715 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 RPL10P27635 214 aaKnown RBP11.94□□□□□ -0.5
LIMS2-210ENST00000413578 PPP1CAP62136 330 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 IFI35P80217 286 aaPredicted RBP11.94□□□□□ -0.5
LIMS2-210ENST00000413578 GALNT3Q14435 633 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 SEPT7Q16181 437 aaKnown RBP11.94□□□□□ -0.5
LIMS2-210ENST00000413578 UGT8Q16880 541 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 PLA2G4EQ3MJ16 856 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 TDRD12Q587J7 1177 aaKnown RBP11.94□□□□□ -0.5
LIMS2-210ENST00000413578 FIGNQ5HY92 759 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 ALS2CLQ60I27 953 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 PWWP2BQ6NUJ5 590 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 ZNF517Q6ZMY9 492 aaPredicted RBP11.94□□□□□ -0.5
LIMS2-210ENST00000413578 TRIM48Q8IWZ4 208 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 CPT1CQ8TCG5 803 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 ZDHHC12Q96GR4 267 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 NAP1L5Q96NT1 182 aaPredicted RBP11.94□□□□□ -0.5
LIMS2-210ENST00000413578 FCRL4Q96PJ5 515 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 ADGRE3Q9BY15 652 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 MAGEE1Q9HCI5 957 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 DNAJC16Q9Y2G8 782 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 WDR37Q9Y2I8 494 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 MAP4K5Q9Y4K4 846 aa11.94□□□□□ -0.5
LIMS2-210ENST00000413578 IGHV5-51A0A0C4DH38 117 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 TTLL8A6PVC2 850 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 PDZK1P1A8MUH7 402 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 MYO1FO00160 1098 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 KCNK1O00180 336 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 SEMA7AO75326 666 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 VPS4BO75351 444 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 AGFG2O95081 481 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 JCHAINP01591 159 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 CCNYL3P0C7X3 344 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 PTPN4P29074 926 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 CASP14P31944 242 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 DRG2P55039 364 aaKnown RBP11.93□□□□□ -0.5
LIMS2-210ENST00000413578 PPIDQ08752 370 aaKnown RBP11.93□□□□□ -0.5
LIMS2-210ENST00000413578 TUBB3Q13509 450 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms