RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 COLEC10Q9Y6Z7 277 aa6.31□□□□□ -1.4
USP54-202ENST00000413442 ASXL3Q9C0F0 2248 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 RP1P56715 2156 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 SCN8AQ9UQD0 1980 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.3□□□□□ -1.4
USP54-202ENST00000413442 TRBV5-4A0A0C4DH59 114 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 MROH6A6NGR9 719 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 PRR19A6NJB7 356 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 D6RAR5 112 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 MATN2O00339 956 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 PLD2O14939 933 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 CAPN5O15484 640 aaPredicted RBP6.3□□□□□ -1.4
USP54-202ENST00000413442 LDB2O43679 373 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 DUX1O43812 170 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 KIF5CO60282 957 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 TOP3BO95985 862 aaKnown RBP6.3□□□□□ -1.4
USP54-202ENST00000413442 VIPP01282 170 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 ATP1A1P05023 1023 aaKnown RBP6.3□□□□□ -1.4
USP54-202ENST00000413442 RPLP0P05388 317 aaKnown RBP6.3□□□□□ -1.4
USP54-202ENST00000413442 MLNP12872 115 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 ZNF8P17098 575 aaPredicted RBP6.3□□□□□ -1.4
USP54-202ENST00000413442 TCP1P17987 556 aaKnown RBP6.3□□□□□ -1.4
USP54-202ENST00000413442 SPINK2P20155 84 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 PSMB4P28070 264 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 ALDH4A1P30038 563 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 NSG1P42857 185 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 POLD2P49005 469 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 LMAN1P49257 510 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 LIMK2P53671 638 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 PCBP4P57723 403 aaKnown RBP6.3□□□□□ -1.4
USP54-202ENST00000413442 RAB15P59190 212 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 CCL7P80098 99 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 HHEXQ03014 270 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 CACNG1Q06432 222 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 NFATC2Q13469 925 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 SEMA5AQ13591 1074 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 INSCQ1MX18 579 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 BCL7AQ4VC05 210 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 ATP13A5Q4VNC0 1218 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 AARS2Q5JTZ9 985 aaKnown RBP6.3□□□□□ -1.4
USP54-202ENST00000413442 PCID2Q5JVF3 399 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 PERM1Q5SV97 790 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 METRNLQ641Q3 311 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 DENND5AQ6IQ26 1287 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 SLC30A9Q6PML9 568 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 RAB11FIP2Q7L804 512 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 PCGF5Q86SE9 256 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 PELI3Q8N2H9 469 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 MPP5Q8N3R9 675 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 FBXO39Q8N4B4 442 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 SLC25A41Q8N5S1 370 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 DNAAF3Q8N9W5 541 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 KYQ8NBH2 561 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 AGBL5Q8NDL9 886 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 PHC3Q8NDX5 983 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 OR4K2Q8NGD2 314 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 OR2L2Q8NH16 312 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 CCDC110Q8TBZ0 833 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 ACTRT1Q8TDG2 376 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 CCDC74AQ96AQ1 378 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 WBP1Q96G27 269 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 CDKN2AIPNLQ96HQ2 116 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 FCRL4Q96PJ5 515 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 TCF12Q99081 682 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 CD180Q99467 661 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 COPS8Q99627 209 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 FICDQ9BVA6 458 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 CEP41Q9BYV8 373 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 IL22Q9GZX6 179 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 OR2AG1Q9H205 316 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 TRIT1Q9H3H1 467 aaKnown RBP6.3□□□□□ -1.4
USP54-202ENST00000413442 KLC4Q9NSK0 619 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 KCNK4Q9NYG8 393 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 BFARQ9NZS9 450 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 ANAPC5Q9UJX4 755 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 PCDHGA3Q9Y5H0 932 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 SPO11Q9Y5K1 396 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 RNF215Q9Y6U7 377 aa6.3□□□□□ -1.4
USP54-202ENST00000413442 IGLV3-16A0A075B6K0 115 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 IGHV1OR21-1A0A087WYE8 117 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 GOLGA6L10A0A0M3HER8 536 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 A0A1W2PQM1 296 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 A6NCN8 305 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 CDRT15L2A8MXV6 281 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 B4DGG1 531 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 B4E171 279 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.29□□□□□ -1.4
USP54-202ENST00000413442 TK2O00142 265 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 LIN7AO14910 233 aaPredicted RBP6.29□□□□□ -1.4
USP54-202ENST00000413442 AURKAO14965 403 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 PPM1DO15297 605 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 MAP3K7O43318 606 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 B4GAT1O43505 415 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 CEP104O60308 925 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 POP7O75817 140 aaKnown RBP6.29□□□□□ -1.4
USP54-202ENST00000413442 PRAMEF1O95521 474 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 METTL18O95568 372 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 FGGP02679 453 aa6.29□□□□□ -1.4
USP54-202ENST00000413442 ANKRD34CP0C6C1 535 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms