RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 KCTD19Q17RG1 926 aaPredicted RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 PTPN20Q4JDL3 420 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 FASTKD1Q53R41 847 aaKnown RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 C2CD6Q53TS8 623 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 ZNF667Q5HYK9 610 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 TEDDM1Q5T9Z0 273 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 FAM160B1Q5W0V3 765 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 AFMIDQ63HM1 303 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 PDPK2PQ6A1A2 396 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 SPOPLQ6IQ16 392 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 SWSAP1Q6NVH7 229 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 C1orf228Q6PIY5 440 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 UGT2A3Q6UWM9 527 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 SLC30A10Q6XR72 485 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 TSHZ1Q6ZSZ6 1077 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 RAPH1Q70E73 1250 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 SMIM5Q71RC9 77 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 CAND1Q86VP6 1230 aaKnown RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 CCDC60Q8IWA6 550 aaPredicted RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 ZBTB8OSQ8IWT0 167 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 PGAM4Q8N0Y7 254 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 NUP93Q8N1F7 819 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 PQLC1Q8N2U9 271 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 WDTC1Q8N5D0 677 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 CPSF7Q8N684 471 aaKnown RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 ARFGAP1Q8N6T3 406 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 PLD5Q8N7P1 536 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 AGBL3Q8NEM8 1001 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 OR5B17Q8NGF7 314 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 RP9Q8TA86 221 aaKnown RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 SLC26A7Q8TE54 656 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 DEPDC1BQ8WUY9 529 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 FATE1Q969F0 183 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 CFAP36Q96G28 342 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 PRMT6Q96LA8 375 aaPredicted RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 C12orf42Q96LP6 360 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 BIRC8Q96P09 236 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 QKIQ96PU8 341 aaKnown RBP eCLIP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 TAAR1Q96RJ0 339 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 KLF6Q99612 283 aaPredicted RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 CPNE1Q99829 537 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 ADPGKQ9BRR6 497 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 CALN1Q9BXU9 219 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 NFKBIZQ9BYH8 718 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 INO80BQ9C086 356 aaPredicted RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 MTMR12Q9C0I1 747 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 PRDM13Q9H4Q3 707 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 EBF3Q9H4W6 596 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 USP29Q9HBJ7 922 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 VTA1Q9NP79 307 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 ZNF302Q9NR11 478 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 NRBP2Q9NSY0 501 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 ETNK2Q9NVF9 386 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 NSMCE4AQ9NXX6 385 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 TUBA8Q9NY65 449 aaPredicted RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 UTP6Q9NYH9 597 aaKnown RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 MOCS1Q9NZB8 636 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 TXNDC16Q9P2K2 825 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 EPS15L1Q9UBC2 864 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 CPSF3Q9UKF6 684 aaKnown RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 POMPQ9Y244 141 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 ANKRD6Q9Y2G4 727 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 DNAJC16Q9Y2G8 782 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 LCTP09848 1927 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 FNDC1Q4ZHG4 1894 aaPredicted RBP3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 A0A0G2JMZ2 1700 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 LRRC37A2A6NM11 1700 aa3.56□□□□□ -1.84
RNU6-55P-201ENST00000411092 ZNF541Q9H0D2 1346 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 CCDC195A0A1B0GUA6 201 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 TCRBV7S3A2A0A539 114 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 RGSL1A5PLK6 1076 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 TMEM150BA6NC51 233 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 C2CD4BA6NLJ0 364 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 TCP10L2B9ZVM9 353 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 M0QYV0 167 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 VWA5AO00534 786 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 KCNN4O15554 427 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 TIMM44O43615 452 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 BANF1O75531 89 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 BCAS2O75934 225 aaPredicted RBP3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 HSPA4LO95757 839 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 POLBP06746 335 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 APRTP07741 180 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 CD48P09326 243 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 HOXC6P09630 235 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 FAM58BPP0C7Q3 252 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 FAM200BP0CF97 657 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 SMIM18P0DKX4 95 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 CSH1P0DML2 217 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 CSH2P0DML3 217 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 HSPA1AP0DMV8 641 aaKnown RBP3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 HSPA1BP0DMV9 641 aaKnown RBP3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 TGFB3P10600 412 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 RALBP11234 206 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 MYCLP12524 364 aaPredicted RBP3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 COX4I1P13073 169 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 CD19P15391 556 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 PDGFRAP16234 1089 aa3.55□□□□□ -1.84
RNU6-55P-201ENST00000411092 ZNF23P17027 643 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms