RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 IL12AP29459 219 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 IL2P60568 153 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 GPNMBQ14956 572 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 Q6ZSR9 355 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 FIBCD1Q8N539 461 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 FAM47BQ8NA70 645 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 DIS3LQ8TF46 1054 aaKnown RBP15.73■□□□□ 0.11
HOXD3-202ENST00000410016 TMIGD2Q96BF3 282 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 CENPNQ96H22 339 aaPredicted RBP15.73■□□□□ 0.11
HOXD3-202ENST00000410016 GLT1D1Q96MS3 346 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 PLEKHG4BQ96PX9 1271 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 ALG2Q9H553 416 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 ELAC1Q9H777 363 aaKnown RBP15.73■□□□□ 0.11
HOXD3-202ENST00000410016 BPIFA1Q9NP55 256 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 SMOXQ9NWM0 555 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 ST14Q9Y5Y6 855 aa15.73■□□□□ 0.11
HOXD3-202ENST00000410016 ZNF840PA6NDX5 716 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 CBX4O00257 560 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 MTHFD1P11586 935 aaKnown RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 CES1P23141 567 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 FASP25445 335 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 KCNK10P57789 538 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 NFYCQ13952 458 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 C6orf136Q5SQH8 315 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 PRSS55Q6UWB4 352 aaPredicted RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 GPSM1Q86YR5 675 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 TTC30BQ8N4P2 665 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 TMEM199Q8N511 208 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 OR56A4Q8NGH8 313 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 PROKR1Q8TCW9 393 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 C2orf15Q8WU43 125 aaKnown RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 KCNJ9Q92806 393 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 LINGO1Q96FE5 620 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 RMND5BQ96G75 393 aaPredicted RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 RPL10LQ96L21 214 aaKnown RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 CDK5RAP1Q96SZ6 601 aaKnown RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 NMRK2Q9NPI5 230 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 RNF186Q9NXI6 227 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 TRMT6Q9UJA5 497 aaKnown RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 H7C0S8 307 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 COCHO43405 550 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 TPST1O60507 370 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 BAIAP3O94812 1187 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 GPIP06744 558 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 ADARP55265 1226 aaKnown RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 ERVK-8P63133 956 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 TUBA4AP68366 448 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 ARF5P84085 180 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 LIPEQ05469 1076 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 PDCD4Q53EL6 469 aaKnown RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 EFL1Q7Z2Z2 1120 aaKnown RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 CPNE9Q8IYJ1 553 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 TRIML2Q8N7C3 387 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 OR52B6Q8NGF0 335 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 HM13Q8TCT9 377 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 CLK4Q9HAZ1 481 aaKnown RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 GKN1Q9NS71 199 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 EIF2B4Q9UI10 523 aaKnown RBP15.72■□□□□ 0.11
HOXD3-202ENST00000410016 PCDHB7Q9Y5E2 793 aa15.72■□□□□ 0.11
HOXD3-202ENST00000410016 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.71■□□□□ 0.11
HOXD3-202ENST00000410016 SNX2O60749 519 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 STC2O76061 302 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 OR4F21O95013 312 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 CHEK2O96017 543 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 GALTP07902 379 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 RHOCP08134 193 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 RPL10P27635 214 aaKnown RBP15.71■□□□□ 0.11
HOXD3-202ENST00000410016 POLR2JP52435 117 aaKnown RBP15.71■□□□□ 0.11
HOXD3-202ENST00000410016 ERVPABLB-1P60509 514 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 PLOD1Q02809 727 aaPredicted RBP15.71■□□□□ 0.11
HOXD3-202ENST00000410016 TRAF2Q12933 501 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 ZNF177Q13360 481 aaPredicted RBP15.71■□□□□ 0.11
HOXD3-202ENST00000410016 TGFBIQ15582 683 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 ATP6AP1Q15904 470 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 FXNQ16595 210 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 CYP51A1Q16850 503 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 NANOGP8Q6NSW7 305 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 GPRIN3Q6ZVF9 776 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 ANKS3Q6ZW76 656 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 SPRED1Q7Z699 444 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 IFNEQ86WN2 208 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 DCBLD1Q8N8Z6 715 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 PAPD5Q8NDF8 572 aaKnown RBP15.71■□□□□ 0.11
HOXD3-202ENST00000410016 ZNF382Q96SR6 550 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 C1orf50Q9BV19 199 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 MUC13Q9H3R2 512 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 CWH43Q9H720 699 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 NANOGQ9H9S0 305 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 DDX18Q9NVP1 670 aaKnown RBP15.71■□□□□ 0.11
HOXD3-202ENST00000410016 OAZ3Q9UMX2 235 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 GBF1Q92538 1859 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 CCDC154A6NI56 674 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 IQCF5A8MTL0 148 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 H7C4K7 107 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 INPP4BO15327 924 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 GPR39O43194 453 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 NBNO60934 754 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 CLCN7P51798 805 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 RBBP7Q16576 425 aa15.71■□□□□ 0.11
HOXD3-202ENST00000410016 ZRANB3Q5FWF4 1079 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms