RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ZNF395Q9H8N7 513 aaPredicted RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 NPHS2Q9NP85 383 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 CACNA2D2Q9NY47 1150 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 TRMT6Q9UJA5 497 aaKnown RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 FAM50BQ9Y247 325 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 FNDC3AQ9Y2H6 1198 aaKnown RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 USH1CQ9Y6N9 552 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 CCT8L1PA6NM43 557 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 GOLGA8CPA6NN73 597 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 FADS2P1A8MWK0 482 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 F8W8V4 182 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 H3BQ06 376 aaPredicted RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 AP1G1O43747 822 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 KLK8O60259 260 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 KERAO60938 352 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 LYPLA1O75608 230 aaPredicted RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 EPHX1P07099 455 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 ELFN1P0C7U0 828 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 IGFBP4P22692 258 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 XPAP23025 273 aaPredicted RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 ETV3P41162 512 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 KCNC1P48547 511 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 HK2P52789 917 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 SFSWAPQ12872 951 aaKnown RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 RCN2Q14257 317 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 GBX1Q14549 363 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 OR4D1Q15615 310 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 C2orf27AQ580R0 203 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 TMEM196Q5HYL7 178 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 PIP5KL1Q5T9C9 394 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 Q6ZVL8 140 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 ERN2Q76MJ5 926 aaKnown RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 NLRP8Q86W28 1048 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 CRLF3Q8IUI8 442 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 SLC22A9Q8IVM8 553 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 PPP1R14CQ8TAE6 165 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 PIWIL2Q8TC59 973 aaKnown RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 STON2Q8WXE9 905 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 INPP5DQ92835 1189 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 ABCG8Q9H221 673 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 C8orf33Q9H7E9 229 aaPredicted RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 UBE2ZQ9H832 354 aaPredicted RBP5.46□□□□□ -1.54
EPHA4-202ENST00000409854 CD248Q9HCU0 757 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 KCNK4Q9NYG8 393 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 IKZF3Q9UKT9 509 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 ITM2BQ9Y287 266 aa5.46□□□□□ -1.54
EPHA4-202ENST00000409854 ZFC3H1O60293 1989 aaKnown RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 SZT2Q5T011 3432 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 EIF3FO00303 357 aaPredicted RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 ZNF195O14628 629 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 IPO13O94829 963 aaKnown RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 ADH1BP00325 375 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 SOD1P00441 154 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 MTHFD2P13995 350 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 KCNA5P22460 613 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 DRD3P35462 400 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 P2RY2P41231 377 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 LIG3P49916 1009 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 COPAP53621 1224 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 DPTQ07507 201 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 GALNT1Q10472 559 aaPredicted RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 HSF5Q4G112 596 aaPredicted RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 LACTB2Q53H82 288 aaPredicted RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 SPDYAQ5MJ70 313 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 GPRC6AQ5T6X5 926 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 FAM46CQ5VWP2 391 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 FBXL19Q6PCT2 694 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 TRPM8Q7Z2W7 1104 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 PIWIL4Q7Z3Z4 852 aaKnown RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 MMAAQ8IVH4 418 aaKnown RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 LSMEM2Q8N112 164 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 SLC44A3Q8N4M1 653 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 MSANTD3Q96H12 275 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 TMEM237Q96Q45 408 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 COPS8Q99627 209 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 SLX1AQ9BQ83 275 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 UNKQ9C0B0 810 aaKnown RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 STN1Q9H668 368 aaKnown RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 ALG9Q9H6U8 611 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 FBRSQ9HAH7 460 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 CD84Q9UIB8 345 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 DOCK9Q9BZ29 2069 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 SHISA7A6NL88 538 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 IQCF5A8MTL0 148 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 E5RI56 91 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 WNT9AO14904 365 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 SGTAO43765 313 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 AP2A2O94973 939 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 GLULP15104 373 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 PSMD8P48556 350 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 TRPC1P48995 793 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 IL2P60568 153 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 IFT88Q13099 833 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 AGERQ15109 404 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 POM121L1PQ3SYA9 428 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 AGBL4Q5VU57 503 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 PTRHD1Q6GMV3 140 aaKnown RBP5.45□□□□□ -1.54
EPHA4-202ENST00000409854 CPNE9Q8IYJ1 553 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 AADATQ8N5Z0 425 aa5.45□□□□□ -1.54
EPHA4-202ENST00000409854 STAG3L4Q8TBR4 150 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms