RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 UGT1A4P22310 534 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 CA5AP35218 305 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 UGT1A3P35503 534 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 UGT1A5P35504 534 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 SPINT3P49223 89 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 IL2P60568 153 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 HERVK_113P63132 956 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 SEMG2Q02383 582 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 TDGQ13569 410 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 ARHGEF7Q14155 803 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 ZNF678Q5SXM1 525 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 SEL1L3Q68CR1 1132 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 PTRHD1Q6GMV3 140 aaKnown RBP13.94□□□□□ -0.18
LIMS2-206ENST00000409754 FRMD7Q6ZUT3 714 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 KIRREL3Q8IZU9 778 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 CPA6Q8N4T0 437 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 NXPE3Q969Y0 559 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 ULK4Q96C45 1275 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 PHF21BQ96EK2 531 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 PTCD3Q96EY7 689 aaKnown RBP13.94□□□□□ -0.18
LIMS2-206ENST00000409754 PDLIM5Q96HC4 596 aaKnown RBP13.94□□□□□ -0.18
LIMS2-206ENST00000409754 NSL1Q96IY1 281 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 ERVK-6Q9BXR3 956 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 ACSS2Q9NR19 701 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 ARHGEF3Q9NR81 526 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 ARL8BQ9NVJ2 186 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 PKD2L2Q9NZM6 624 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 ZDHHC2Q9UIJ5 367 aa13.94□□□□□ -0.18
LIMS2-206ENST00000409754 SYCE1LA8MT33 242 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 CAPN14A8MX76 684 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 DIAPH2O60879 1101 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 MTHFD2P13995 350 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 NQO1P15559 274 aaKnown RBP13.93□□□□□ -0.18
LIMS2-206ENST00000409754 PSMC3P17980 439 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 CALB2P22676 271 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 MACC1Q6ZN28 852 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 RAB44Q7Z6P3 723 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-206ENST00000409754 DTX3LQ8TDB6 740 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 SLC7A6OSQ96CW6 309 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-206ENST00000409754 LINGO1Q96FE5 620 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 FAR2Q96K12 515 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 CCDC106Q9BWC9 280 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 BOCQ9BWV1 1114 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 MTG2Q9H4K7 406 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 GSTO2Q9H4Y5 243 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 PCDH12Q9NPG4 1184 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 ZDHHC3Q9NYG2 299 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 RNF112Q9ULX5 631 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 KIAA1549LQ6ZVL6 1849 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 UBXN8O00124 270 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 GRID2O43424 1007 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 ALDH18A1P54886 795 aaKnown RBP13.93□□□□□ -0.18
LIMS2-206ENST00000409754 DCDC1P59894 354 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 KDSRQ06136 332 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 MESP2Q0VG99 397 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 RUNX3Q13761 415 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 TSNQ15631 228 aaKnown RBP13.93□□□□□ -0.18
LIMS2-206ENST00000409754 FNDC3BQ53EP0 1204 aaKnown RBP13.93□□□□□ -0.18
LIMS2-206ENST00000409754 UNC50Q53HI1 259 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 VWA5B1Q5TIE3 1220 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 METTL21CQ5VZV1 264 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 NAIF1Q69YI7 327 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-206ENST00000409754 DPPA4Q7L190 304 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 CPNE9Q8IYJ1 553 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 PHTF2Q8N3S3 785 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 PTGR2Q8N8N7 351 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-206ENST00000409754 TERB1Q8NA31 727 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 AGR3Q8TD06 166 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 MAPK15Q8TD08 544 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 FUBP1Q96AE4 644 aaKnown RBP13.93□□□□□ -0.18
LIMS2-206ENST00000409754 SLC40A1Q9NP59 571 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 C11orf16Q9NQ32 467 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 SLC2A4RGQ9NR83 387 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 RAD18Q9NS91 495 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 ARMCX1Q9P291 453 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 NFKBIL1Q9UBC1 381 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-206ENST00000409754 IKZF3Q9UKT9 509 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 TMCO1Q9UM00 188 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 TRIM33Q9UPN9 1127 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 PRSS21Q9Y6M0 314 aa13.93□□□□□ -0.18
LIMS2-206ENST00000409754 EDDM13A0A1B0GTR0 161 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 KRBA1A5PL33 1030 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 RGSL1A5PLK6 1076 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 NPEPPSL1A6NEC2 478 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 C16orf96A6NNT2 1141 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 IQCF5A8MTL0 148 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 CDC7O00311 574 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 BTN3A1O00481 513 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 KLK8O60259 260 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 RASSF9O75901 435 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 PRNPP04156 253 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 SRFP11831 508 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 HNRNPLP14866 589 aaKnown RBP eCLIP13.92□□□□□ -0.18
LIMS2-206ENST00000409754 XPAP23025 273 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-206ENST00000409754 PTPN4P29074 926 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 GDI1P31150 447 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 NSG1P42857 185 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 NAA20P61599 178 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 KCNJ2P63252 427 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 ZXDAP98168 799 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms