RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 IL17CQ9P0M4 197 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 PISDQ9UG56 409 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 RSPH14Q9UHP6 348 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 AMFRQ9UKV5 643 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 VPS9D1Q9Y2B5 631 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 RCCD1A6NED2 376 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 C2orf81A6NN90 581 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 GOLGA6L6A8MZA4 724 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 B4E171 279 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 RBP3P10745 1247 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 ZNF7P17097 686 aaPredicted RBP14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 IDSP22304 550 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 RBL1P28749 1068 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 SPAM1P38567 509 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 TSPAN7P41732 249 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 RAB15P59190 212 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 CLN3Q13286 438 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 GTF2H3Q13889 308 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 AGAP9Q5VTM2 703 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 ALS2CLQ60I27 953 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 ABRAXAS1Q6UWZ7 409 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 RANBP10Q6VN20 620 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 B4GALNT4Q76KP1 1039 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 GLT6D1Q7Z4J2 308 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 RNF10Q8N5U6 811 aaKnown RBP14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 LRRC57Q8N9N7 239 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 ACTL9Q8TC94 416 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 PATE1Q8WXA2 126 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 TEFMQ96QE5 360 aaKnown RBP14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 ZPBPQ9BS86 351 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 DDA1Q9BW61 102 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 LACRTQ9GZZ8 138 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 GBA3Q9H227 469 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 IL26Q9NPH9 171 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 KLC4Q9NSK0 619 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 CPNE7Q9UBL6 633 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 TFR2Q9UP52 801 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 SPO11Q9Y5K1 396 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 DUSP10Q9Y6W6 482 aa14.34□□□□□ -0.11
NIF3L1-205ENST00000409588 AURKAO14965 403 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 STX7O15400 261 aaKnown RBP14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 TOX3O15405 576 aaPredicted RBP14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 PTMAP06454 111 aaKnown RBP14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 THRAP10827 490 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 PYGMP11217 842 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 MARCKSL1P49006 195 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 EIF3EP60228 445 aaKnown RBP14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 LLGL1Q15334 1064 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 TAF1AQ15573 450 aaPredicted RBP14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 INSCQ1MX18 579 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 ATP13A5Q4VNC0 1218 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 ANKRD20A2Q5SQ80 823 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 ANKRD20A1Q5TYW2 823 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 ANKRD20A3Q5VUR7 823 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 DARS2Q6PI48 645 aaKnown RBP14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 RAD9BQ6WBX8 426 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 TMPRSS9Q7Z410 1059 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 PEX26Q7Z412 305 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 PLXDC1Q8IUK5 500 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 TTC30BQ8N4P2 665 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 BEND7Q8N7W2 519 aaPredicted RBP14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 ZSCAN1Q8NBB4 408 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 IPMKQ8NFU5 416 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 GDAP1Q8TB36 358 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 USP7Q93009 1102 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 CRELD1Q96HD1 420 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 OXNAD1Q96HP4 312 aaPredicted RBP14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 NUDT22Q9BRQ3 303 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 KCNK6Q9Y257 313 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 REXO2Q9Y3B8 237 aaKnown RBP14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 PRKAB1Q9Y478 270 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 PTPRQQ9UMZ3 2332 aa14.33□□□□□ -0.12
NIF3L1-205ENST00000409588 TRBV23OR9-2A0A075B6M9 112 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 GLYATL1P3A0A0U1RQE8 302 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 LILRA5A6NI73 299 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 SNX2O60749 519 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 CRTAMO95727 393 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 VIPP01282 170 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 HGFP14210 728 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 LPOP22079 712 aaPredicted RBP14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 C16orf72Q14CZ0 275 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 ARHGAP40Q5TG30 622 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 NKAIN2Q5VXU1 208 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 ARHGAP22Q7Z5H3 698 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 DTX1Q86Y01 620 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 SLC25A41Q8N5S1 370 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 DDHD1Q8NEL9 900 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 BLOC1S5Q8TDH9 187 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 HEXDCQ8WVB3 486 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 CCDC74BQ96LY2 380 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 ARNT2Q9HBZ2 717 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 CPNE5Q9HCH3 593 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 BPIFA1Q9NP55 256 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 PRDM8Q9NQV8 689 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 POT1Q9NUX5 634 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 SMOXQ9NWM0 555 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 LOC400499M0QZD8 3231 aa14.32□□□□□ -0.12
NIF3L1-205ENST00000409588 PRAMEF33A0A0G2JMD5 474 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 PMS2P1A4D2B8 440 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms