RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ZNF641Q96N77 438 aaPredicted RBP16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 SLC2A13Q96QE2 648 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 LRTM1Q9HBL6 345 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 C8orf4Q9NR00 106 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 CREB1P16220 341 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 DEFA1P59665 94 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 DEFA3P59666 94 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 STXBP1P61764 594 aaKnown RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 TTC29Q8NA56 475 aaPredicted RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 SEPHS2Q99611 448 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 TMEM189-UBE2V1I3L0A0 370 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 RFXANKO14593 260 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 NDUFB5O43674 189 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 TBX18O95935 607 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 CHRNA1P02708 482 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 BMPR1AP36894 532 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 SLC25A11Q02978 314 aaKnown RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 SLC44A4Q53GD3 710 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 INO80DQ53TQ3 878 aaPredicted RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 TMEM63BQ5T3F8 832 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 DNAJC14Q6Y2X3 702 aaPredicted RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 PROSER1Q86XN7 944 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 CAMK1DQ8IU85 385 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 DPP10Q8N608 796 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 LMO3Q8TAP4 145 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 ZSCAN18Q8TBC5 510 aaPredicted RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 LCN9Q8WX39 176 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 PANX1Q96RD7 426 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 NMUR2Q9GZQ4 415 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 NPEPPSL1A6NEC2 478 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 LIN7AO14910 233 aaPredicted RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 PCCBP05166 539 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 PAICSP22234 425 aaKnown RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 NOS3P29474 1203 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 CHN2P52757 468 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 LBX1P52954 281 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 NAE1Q13564 534 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 CPTPQ5TA50 214 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 RNF19BQ6ZMZ0 732 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 ZNF248Q8NDW4 579 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 AZIN2Q96A70 460 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 MYOCQ99972 504 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 AARSD1Q9BTE6 412 aaKnown RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 WRAP53Q9BUR4 548 aaKnown RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 STRA6Q9BX79 667 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 MRM3Q9HC36 420 aaKnown RBP16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 ADGRE2Q9UHX3 823 aa16.64■□□□□ 0.25
PCDHA13-202ENST00000409494 RHPN2P1A8MT19 583 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 UPK3BL1B0FP48 263 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 UPK3BL2E5RIL1 263 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 PRAMEF11O60813 436 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 RASGRP1O95267 797 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 NUDT14O95848 222 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 SLC35G6P0C7Q6 338 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 NR2F1P10589 423 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 GNAZP19086 355 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 VARSP26640 1264 aaKnown RBP16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 HNMTP50135 292 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 DCAF12L1Q5VU92 463 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 TTC23Q5W5X9 447 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 B3GALT6Q96L58 329 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 RHOBTB2Q9BYZ6 727 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 GULP1Q9UBP9 304 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 PRR5-ARHGAP8B1AHC4 643 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 CLOCKO15516 846 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 ARHGAP8P85298 464 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 RFX4Q33E94 735 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 CCDC81Q6ZN84 652 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 KLHL23Q8NBE8 558 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 DDX1Q92499 740 aaKnown RBP16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 RPL10LQ96L21 214 aaKnown RBP16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 ZMAT2Q96NC0 199 aaKnown RBP16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 WDR26Q9H7D7 661 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 SLC2A4RGQ9NR83 387 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 DNAJC28Q9NX36 388 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 ITGB4P16144 1822 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 LEFTY2O00292 366 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 PLIN3O60664 434 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 ZMPSTE24O75844 475 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 ADH1BP00325 375 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 TRIM16LQ309B1 348 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 DEPDC1Q5TB30 811 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 FSTL4Q6MZW2 842 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 ZNF280BQ86YH2 543 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 NAT8LQ8N9F0 302 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 LRRN4Q8WUT4 740 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 AUTS2Q8WXX7 1259 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 NXNL1Q96CM4 212 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 SNX10Q9Y5X0 201 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 ABLIM1O14639 778 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 IL1R2P27930 398 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 NMBRP28336 390 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 GJA5P36382 358 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 UBXN11Q5T124 520 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 TPD52L3Q96J77 140 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 OR52E6Q96RD3 313 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 NEK6Q9HC98 313 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 DUSP12Q9UNI6 340 aa16.63■□□□□ 0.25
PCDHA13-202ENST00000409494 HIST1H2ABP04908 130 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms