RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TIPRLO75663 272 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 LATS1O95835 1130 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 CLPTM1O96005 669 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 PSMC3P17980 439 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 SLC6A2P23975 617 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 RPL5P46777 297 aaKnown RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 PPP3CCP48454 512 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 CLCN7P51798 805 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 SMAD3P84022 425 aaKnown RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 NFYCQ13952 458 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 RCAN2Q14206 197 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 INPP5AQ14642 412 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 TGFBIQ15582 683 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 SPATS1Q496A3 300 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 ISLR2Q6UXK2 745 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 HJURPQ8NCD3 748 aaPredicted RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 TET1Q8NFU7 2136 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 NCSTNQ92542 709 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 SLC45A3Q96JT2 553 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 PLEKHG4BQ96PX9 1271 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 FEM1AQ9BSK4 669 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 OSBPL11Q9BXB4 747 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 TRIM54Q9BYV2 358 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 PCDHB1Q9Y5F3 818 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 TYW5A2RUC4 315 aaKnown RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 C7orf72A4D263 438 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 GOLGA8CPA6NN73 597 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 IQCF5A8MTL0 148 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 SCAMP3O14828 347 aaKnown RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 GPR39O43194 453 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 OR4F21O95013 312 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 GNRH1P01148 92 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 PDCD4Q53EL6 469 aaKnown RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 ATXN7L2Q5T6C5 722 aaPredicted RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 CWF19L1Q69YN2 538 aaKnown RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 LCN8Q6JVE9 175 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 SCIMPQ6UWF3 145 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 ERMP1Q7Z2K6 904 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 CHERPQ8IWX8 916 aaKnown RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 ANKFN1Q8N957 763 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 NAT14Q8WUY8 206 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 MYO19Q96H55 970 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 ZFRQ96KR1 1074 aaKnown RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 CIB1Q99828 191 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 CCT7Q99832 543 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 BRINP2Q9C0B6 783 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 NOL11Q9H8H0 719 aaKnown RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 MAGEE1Q9HCI5 957 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 CCM2LQ9NUG4 571 aaPredicted RBP16.66■□□□□ 0.26
NUP50-203ENST00000407019 VPS51Q9UID3 782 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 DHRS7Q9Y394 339 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 ASB1Q9Y576 335 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 EME2A4GXA9 379 aaPredicted RBP16.65■□□□□ 0.26
NUP50-203ENST00000407019 PRMT5O14744 637 aaPredicted RBP16.65■□□□□ 0.26
NUP50-203ENST00000407019 AKAP10O43572 662 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 PQBP1O60828 265 aaKnown RBP16.65■□□□□ 0.26
NUP50-203ENST00000407019 CTPS1P17812 591 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 HMGCLP35914 325 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 CSKP41240 450 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 AP1S1P61966 158 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 ERVK-8P63133 956 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 ARMC12Q5T9G4 340 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 FRA10AC1Q70Z53 315 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 LYSMD3Q7Z3D4 306 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
NUP50-203ENST00000407019 GOLM1Q8NBJ4 401 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 OR2T11Q8NH01 316 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 PDLIM5Q96HC4 596 aaKnown RBP16.65■□□□□ 0.26
NUP50-203ENST00000407019 ACOX2Q99424 681 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 CFHR5Q9BXR6 569 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 CREBZFQ9NS37 354 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 ACTR3BQ9P1U1 418 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 EGFL7Q9UHF1 273 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 PCDHA9Q9Y5H5 950 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 OR51B4Q9Y5P0 310 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 SLC4A7Q9Y6M7 1214 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 DHRS12A0PJE2 317 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 EEDO75530 441 aaKnown RBP16.65■□□□□ 0.26
NUP50-203ENST00000407019 SLC22A3O75751 556 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 PRAMEF12O95522 483 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 CXCL10P02778 98 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 SOD2P04179 222 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 BMP2P12643 396 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 ZFP36L2P47974 494 aaKnown RBP16.65■□□□□ 0.26
NUP50-203ENST00000407019 CCL23P55773 120 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 TXNL4AP83876 142 aaKnown RBP16.65■□□□□ 0.26
NUP50-203ENST00000407019 CDH18Q13634 790 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 TBCELQ5QJ74 424 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 IYDQ6PHW0 289 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 CERS6Q6ZMG9 384 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.65■□□□□ 0.26
NUP50-203ENST00000407019 SPPL2CQ8IUH8 684 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 CDYL2Q8N8U2 506 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 DCAF4L2Q8NA75 395 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 TMEM125Q96AQ2 219 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 CAPNS2Q96L46 248 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 TEX37Q96LM6 180 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 PRPF18Q99633 342 aaKnown RBP16.65■□□□□ 0.26
NUP50-203ENST00000407019 AURKCQ9UQB9 309 aa16.65■□□□□ 0.26
NUP50-203ENST00000407019 ASPDHA6ND91 283 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms