RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 LKAAEAR1Q8TD35 194 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 KCNJ9Q92806 393 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MOCOSQ96EN8 888 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 COQ10AQ96MF6 247 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CCT8L2Q96SF2 557 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 PITPNM3Q9BZ71 974 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CDH19Q9H159 772 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 P2RY12Q9H244 342 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 RAD18Q9NS91 495 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 IGSF5Q9NSI5 407 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MKS1Q9NXB0 559 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 PSD3Q9NYI0 1048 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 COPG2Q9UBF2 871 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MBD1Q9UIS9 605 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 PCDHB1Q9Y5F3 818 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 PIKFYVEQ9Y2I7 2098 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 KRBA1A5PL33 1030 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 RGSL1A5PLK6 1076 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 FAM170BA6NMN3 283 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CFAP99D6REC4 459 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 PSMD11O00231 422 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TSPAN6O43657 245 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 BPGMP07738 259 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 DHRS4L1P0CG22 281 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MYL2P10916 166 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 RALBP11234 206 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 COL6A2P12110 1019 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TAC1P20366 129 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TARSP26639 723 aaKnown RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 ALDH3A1P30838 453 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 SKIV2L2P42285 1042 aaKnown RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 SUOXP51687 545 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ADARP55265 1226 aaKnown RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 DCDC1P59894 354 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 HSPA14Q0VDF9 509 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 BOP1Q14137 746 aaKnown RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 TSNAXIP1Q2TAA8 658 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TMEM52BQ4KMG9 183 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 KHDC1Q4VXA5 237 aaKnown RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 UGT3A1Q6NUS8 523 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 DOK6Q6PKX4 331 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 NRSN1Q8IZ57 195 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 PLA2G15Q8NCC3 412 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 GIMAP7Q8NHV1 300 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CD200R1Q8TD46 325 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 EEF1AKMT1Q8WVE0 214 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 BTN2A2Q8WVV5 523 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 GLYATL1Q969I3 302 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 LINGO1Q96FE5 620 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 UBXN10Q96LJ8 280 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 GPR78Q96P69 363 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ZNF317Q96PQ6 595 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 LENG8Q96PV6 779 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 C19orf43Q9BQ61 176 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 SYTL2Q9HCH5 934 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CYP4F12Q9HCS2 524 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 LATS2Q9NRM7 1088 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 C2orf42Q9NWW7 574 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 MMP17Q9ULZ9 603 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 NCKAP1Q9Y2A7 1128 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 COMMD10Q9Y6G5 202 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MUC22E2RYF6 1773 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 DOCK9Q9BZ29 2069 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 VPS13AQ96RL7 3174 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CKAP5Q14008 2032 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 A0A1W2PQU0 124 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 NEMP2A6NFY4 417 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 NCF1BA6NI72 391 aaPredicted RBP3.66□□□□□ -1.82
RTN4-208ENST00000404909 AGAP14A8MT82 685 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 NCF1CA8MVU1 366 aaPredicted RBP3.66□□□□□ -1.82
RTN4-208ENST00000404909 H3BMM5 538 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 BTN3A1O00481 513 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 SLC31A1O15431 190 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 CDK14O94921 469 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 OR56A5P0C7T3 313 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 CHRNB1P11230 501 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 ATP1B2P14415 290 aaPredicted RBP3.66□□□□□ -1.82
RTN4-208ENST00000404909 NCF1P14598 390 aaPredicted RBP3.66□□□□□ -1.82
RTN4-208ENST00000404909 PBLDP30039 288 aaPredicted RBP3.66□□□□□ -1.82
RTN4-208ENST00000404909 PXNP49023 591 aaPredicted RBP3.66□□□□□ -1.82
RTN4-208ENST00000404909 CSRP3P50461 194 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 CLCN7P51798 805 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 KPNA2P52292 529 aaKnown RBP3.66□□□□□ -1.82
RTN4-208ENST00000404909 ADPRHP54922 357 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 IL2P60568 153 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 OVGP1Q12889 678 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 ITIH4Q14624 930 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 PCLAFQ15004 111 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 ACAP2Q15057 778 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 TRIM67Q6ZTA4 783 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 PIWIL4Q7Z3Z4 852 aaKnown RBP3.66□□□□□ -1.82
RTN4-208ENST00000404909 PHYKPLQ8IUZ5 450 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 CCNYL1Q8N7R7 359 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 PTERQ96BW5 349 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 PHF21BQ96EK2 531 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 MSANTD3Q96H12 275 aa3.66□□□□□ -1.82
RTN4-208ENST00000404909 ELAC2Q9BQ52 826 aaKnown RBP3.66□□□□□ -1.82
RTN4-208ENST00000404909 MRPL57Q9BQC6 102 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms