RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TUBB3Q13509 450 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 ENPP2Q13822 863 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 LRIT3Q3SXY7 679 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 CFAP157Q5JU67 520 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 MMAAQ8IVH4 418 aaKnown RBP25.33■■□□□ 1.65
CPNE1-205ENST00000401607 TRAM1L1Q8N609 369 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 PTGR2Q8N8N7 351 aaPredicted RBP25.33■■□□□ 1.65
CPNE1-205ENST00000401607 AGR3Q8TD06 166 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 RIOK2Q9BVS4 552 aaKnown RBP25.33■■□□□ 1.65
CPNE1-205ENST00000401607 SHCBP1LQ9BZQ2 653 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 STN1Q9H668 368 aaKnown RBP25.33■■□□□ 1.65
CPNE1-205ENST00000401607 ZDHHC2Q9UIJ5 367 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 RNF112Q9ULX5 631 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 STON1Q9Y6Q2 735 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 PSMD11O00231 422 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 AREL1O15033 823 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 TRIM16O95361 564 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 ADRB3P13945 408 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 IGFBP4P22692 258 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 ZNF678Q5SXM1 525 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 FBXL19Q6PCT2 694 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 RPS27LQ71UM5 84 aaKnown RBP25.33■■□□□ 1.65
CPNE1-205ENST00000401607 EZH1Q92800 747 aaPredicted RBP25.33■■□□□ 1.65
CPNE1-205ENST00000401607 ERLEC1Q96DZ1 483 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 PPP1R16AQ96I34 528 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 WRAP53Q9BUR4 548 aaKnown RBP25.33■■□□□ 1.65
CPNE1-205ENST00000401607 GSTO2Q9H4Y5 243 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 CD207Q9UJ71 328 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 FADS2P1A8MWK0 482 aa25.32■■□□□ 1.64
CPNE1-205ENST00000401607 LIG3P49916 1009 aa25.32■■□□□ 1.64
CPNE1-205ENST00000401607 IDH3AP50213 366 aa25.32■■□□□ 1.64
CPNE1-205ENST00000401607 RPL14P50914 215 aaKnown RBP25.32■■□□□ 1.64
CPNE1-205ENST00000401607 ZBTB16Q05516 673 aa25.32■■□□□ 1.64
CPNE1-205ENST00000401607 ACTN3Q08043 901 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-205ENST00000401607 SPDYAQ5MJ70 313 aa25.32■■□□□ 1.64
CPNE1-205ENST00000401607 VWA5B1Q5TIE3 1220 aa25.32■■□□□ 1.64
CPNE1-205ENST00000401607 NUDT18Q6ZVK8 323 aa25.32■■□□□ 1.64
CPNE1-205ENST00000401607 MICALL1Q8N3F8 863 aa25.32■■□□□ 1.64
CPNE1-205ENST00000401607 COQ10AQ96MF6 247 aa25.32■■□□□ 1.64
CPNE1-205ENST00000401607 MBD1Q9UIS9 605 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-205ENST00000401607 H0Y858 1186 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 HERVK_113P63132 956 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 ACOX1Q15067 660 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 AAK1Q2M2I8 961 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 UNC50Q53HI1 259 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 FRMD7Q6ZUT3 714 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 DSG4Q86SJ6 1040 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 MAPK15Q8TD08 544 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 CSGALNACT1Q8TDX6 532 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 P2RY13Q9BPV8 354 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 ZSCAN5AQ9BUG6 496 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 ERVK-6Q9BXR3 956 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 NMUR2Q9GZQ4 415 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 LATS2Q9NRM7 1088 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-205ENST00000401607 XIRP2A4UGR9 3374 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 TMEM265A0A087WTH1 108 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 CCDC189A1A4V9 331 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 SUPT3HB4E1H0 165 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 C1QTNF3-AMACRE9PGA6 284 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 H3BQ06 376 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-205ENST00000401607 K7EQS6 105 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 MATN2O00339 956 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 FCHO1O14526 889 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 SUPT3HO75486 399 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 SNUPNO95149 360 aaKnown RBP25.31■■□□□ 1.64
CPNE1-205ENST00000401607 WASP42768 502 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 PSMD8P48556 350 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 ELP6Q0PNE2 266 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 PFKFB4Q16877 469 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 ZBTB2Q8N680 514 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 COG4Q9H9E3 785 aa25.31■■□□□ 1.64
CPNE1-205ENST00000401607 KLK8O60259 260 aa25.3■■□□□ 1.64
CPNE1-205ENST00000401607 HK3P52790 923 aa25.3■■□□□ 1.64
CPNE1-205ENST00000401607 NCALDP61601 193 aa25.3■■□□□ 1.64
CPNE1-205ENST00000401607 ZNF284Q2VY69 593 aa25.3■■□□□ 1.64
CPNE1-205ENST00000401607 ACSBG2Q5FVE4 666 aa25.3■■□□□ 1.64
CPNE1-205ENST00000401607 EPGNQ6UW88 154 aa25.3■■□□□ 1.64
CPNE1-205ENST00000401607 ERN2Q76MJ5 926 aaKnown RBP25.3■■□□□ 1.64
CPNE1-205ENST00000401607 CHPFQ8IZ52 775 aa25.3■■□□□ 1.64
CPNE1-205ENST00000401607 NRSN1Q8IZ57 195 aa25.3■■□□□ 1.64
CPNE1-205ENST00000401607 ZNF513Q8N8E2 541 aaPredicted RBP25.3■■□□□ 1.64
CPNE1-205ENST00000401607 DTD2Q96FN9 168 aa25.3■■□□□ 1.64
CPNE1-205ENST00000401607 RILPQ96NA2 401 aa25.3■■□□□ 1.64
CPNE1-205ENST00000401607 SPATS2LQ9NUQ6 558 aaKnown RBP25.3■■□□□ 1.64
CPNE1-205ENST00000401607 COL4A2P08572 1712 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 GRXCR2A6NFK2 248 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 SYCE1LA8MT33 242 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 WNT9AO14904 365 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 GRID2O43424 1007 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 FSBPO95073 299 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 SIX3O95343 332 aaPredicted RBP25.29■■□□□ 1.64
CPNE1-205ENST00000401607 GFAPP14136 432 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 TNFRSF4P43489 277 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 KIR2DL1P43626 348 aaPredicted RBP25.29■■□□□ 1.64
CPNE1-205ENST00000401607 HK2P52789 917 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 KHDC1Q4VXA5 237 aaKnown RBP25.29■■□□□ 1.64
CPNE1-205ENST00000401607 TXNDC11Q6PKC3 985 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 RAVER1Q8IY67 606 aaKnown RBP25.29■■□□□ 1.64
CPNE1-205ENST00000401607 FBXO39Q8N4B4 442 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms