RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 LPOP22079 712 aaPredicted RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 ATP5C1P36542 298 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 RPS9P46781 194 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 PRKCZQ05513 592 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 PLD1Q13393 1074 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 PGS1Q32NB8 556 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 SLC44A4Q53GD3 710 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 NANOGP8Q6NSW7 305 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 ANGPTL8Q6UXH0 198 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 SAPCD2Q86UD0 394 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 BIRC7Q96CA5 298 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 FBXL8Q96CD0 374 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 CENPNQ96H22 339 aaPredicted RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 MCMBPQ9BTE3 642 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 NSUN3Q9H649 340 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 NANOGQ9H9S0 305 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 SMURF2Q9HAU4 748 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 TMEM248Q9NWD8 314 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 NEU3Q9UQ49 428 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 CEPT1Q9Y6K0 416 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 KNL1Q8NG31 2342 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 CBLBQ13191 982 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 C11orf91Q3C1V1 193 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 KCTD8Q6ZWB6 473 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 C12orf43Q96C57 262 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 DTNBP1Q96EV8 351 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 TSPAN18Q96SJ8 248 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 ZIC5Q96T25 663 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 HS6ST1O60243 411 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 RSL1D1O76021 490 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 ZNF682O95780 498 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 IL7RP16871 459 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 FDXRP22570 491 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 TRAP1Q12931 704 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 TRIP4Q15650 581 aaPredicted RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 MBOAT1Q6ZNC8 495 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 TPGS1Q6ZTW0 290 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 GALNT5Q7Z7M9 940 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 LRRC49Q8IUZ0 686 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 PHACTR4Q8IZ21 702 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 MDGA1Q8NFP4 955 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 GLT1D1Q96MS3 346 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 PLEKHG4BQ96PX9 1271 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 CIPCQ9C0C6 399 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 CLPBQ9H078 707 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 IPPKQ9H8X2 491 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 AASSQ9UDR5 926 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 LEF1Q9UJU2 399 aaPredicted RBP12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 VPS4AQ9UN37 437 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 SLC8A2Q9UPR5 921 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 SCML2Q9UQR0 700 aa12.54□□□□□ -0.4
PPP4R1-202ENST00000400555 TBKBP1A7MCY6 615 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 PEX11BO96011 259 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 ALDH4A1P30038 563 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 HPCAP84074 193 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 CLLU1OSQ5K130 101 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 MANEALQ5VSG8 457 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 ANKRD34AQ69YU3 496 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 CD300LGQ6UXG3 332 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 DEFB128Q7Z7B8 93 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 ITCHQ96J02 903 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 ZNF597Q96LX8 424 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 ASB8Q9H765 288 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 CCM2LQ9NUG4 571 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 PCDHB7Q9Y5E2 793 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 TCRBV3S1A0A5B6 114 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 K7ERQ8 282 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 INSIG1O15503 277 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 C8BP07358 591 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 CORO1AP31146 461 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 SLC6A4P31645 630 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 CCR3P51677 355 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 VAC14Q08AM6 782 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 SLC22A15Q8IZD6 547 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 TRPV3Q8NET8 790 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 FUBP1Q96AE4 644 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 ROPN1LQ96C74 230 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 ASIC4Q96FT7 647 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 MUS81Q96NY9 551 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 TSSK3Q96PN8 268 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 NMRK2Q9NPI5 230 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 CRLS1Q9UJA2 301 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 KRT87PA6NCN2 255 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 TOR1BO14657 336 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 NBNO60934 754 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 IGLV3-25P01717 112 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 BMP1P13497 986 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 ZNF33AQ06730 810 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 DGCR6Q14129 220 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 SELPLGQ14242 412 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 PARP15Q460N3 678 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 AASDHQ4L235 1098 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 C6orf136Q5SQH8 315 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 NADSYN1Q6IA69 706 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 ABRAXAS1Q6UWZ7 409 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.53□□□□□ -0.47e-6■■■■■ 27.5
PPP4R1-202ENST00000400555 PYCR2Q96C36 320 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms