RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 SPG21Q9NZD8 308 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 GABBR2O75899 941 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 GSNP06396 782 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 CCND3P30281 292 aaPredicted RBP18.36■□□□□ 0.53
USP48-204ENST00000400301 NADK2Q4G0N4 442 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 ZNF789Q5FWF6 425 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 RAB42Q8N4Z0 105 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 SETD9Q8NE22 299 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 MUC13Q9H3R2 512 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 AQP12BA6NM10 295 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 F8W810 466 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 H6PDO95479 791 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 S1PR4O95977 384 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 POU1F1P28069 291 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 DAB2P98082 770 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 POM121L1PQ3SYA9 428 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 KIAA0319Q5VV43 1072 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 TRMT11Q7Z4G4 463 aaKnown RBP18.36■□□□□ 0.53
USP48-204ENST00000400301 AQP12AQ8IXF9 295 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 CORO1BQ9BR76 489 aa18.36■□□□□ 0.53
USP48-204ENST00000400301 TRAV19A0A0A6YYK7 116 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 ERVK-8P63133 956 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 CAMK2GQ13555 558 aaPredicted RBP18.35■□□□□ 0.53
USP48-204ENST00000400301 UBE2R2Q712K3 238 aaPredicted RBP18.35■□□□□ 0.53
USP48-204ENST00000400301 C11orf96Q7Z7L8 435 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 CFAP97Q9P2B7 532 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 MTMR11A4FU01 709 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 RFXANKO14593 260 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 ZNF37AP17032 561 aaPredicted RBP18.35■□□□□ 0.53
USP48-204ENST00000400301 S100A5P33763 92 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 MTPNP58546 118 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 NOGQ13253 232 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 CMPK2Q5EBM0 449 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 TMEM214Q6NUQ4 689 aaKnown RBP18.35■□□□□ 0.53
USP48-204ENST00000400301 ZBTB2Q8N680 514 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 ARL14EPQ8N8R7 260 aaPredicted RBP18.35■□□□□ 0.53
USP48-204ENST00000400301 EPOP01588 193 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 FYNP06241 537 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 CYP2A6P11509 494 aaPredicted RBP18.35■□□□□ 0.53
USP48-204ENST00000400301 GPR17Q13304 367 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 RFTN1Q14699 578 aaPredicted RBP18.35■□□□□ 0.53
USP48-204ENST00000400301 ACOX1Q15067 660 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 ADGRF1Q5T601 910 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 KIAA1191Q96A73 305 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 PLD4Q96BZ4 506 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 GABRQQ9UN88 632 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 FAM20BO75063 409 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 SEMG2Q02383 582 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 SCD5Q86SK9 330 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 CHID1Q9BWS9 393 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 PCDH12Q9NPG4 1184 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 HPS4Q9NQG7 708 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 TPRKBQ9Y3C4 175 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 USP3Q9Y6I4 520 aa18.35■□□□□ 0.53
USP48-204ENST00000400301 ILVBLA1L0T0 632 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 LCHNA4D1U4 455 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 SYNDIG1LA6NDD5 238 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 UMPSP11172 480 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 GLDCP23378 1020 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 CDKN2DP55273 166 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 C21orf59P57076 290 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 AP1S1P61966 158 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 ATP1A4Q13733 1029 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 DGCR6Q14129 220 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 FAM171BQ6P995 826 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 ANKRD12Q6UB98 2062 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 UTP15Q8TED0 518 aaKnown RBP18.34■□□□□ 0.53
USP48-204ENST00000400301 TOP1MTQ969P6 601 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 APOLD1Q96LR9 279 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 NSUN5Q96P11 429 aaKnown RBP18.34■□□□□ 0.53
USP48-204ENST00000400301 PANX1Q96RD7 426 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 APOL4Q9BPW4 351 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 ROGDIQ9GZN7 287 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 HIPK3Q9H422 1215 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 ETAA1Q9NY74 926 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 ANKRD31Q8N7Z5 1873 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 MTHFRP42898 656 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 MORN1Q5T089 497 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 ZCCHC8Q6NZY4 707 aaKnown RBP18.34■□□□□ 0.53
USP48-204ENST00000400301 ARHGAP12Q8IWW6 846 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 TRIB2Q92519 343 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 PTPN18Q99952 460 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 REEP1Q9H902 201 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 PTTG2Q9NZH5 202 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 KIAA1522Q9P206 1035 aaPredicted RBP18.34■□□□□ 0.53
USP48-204ENST00000400301 LRRC14BA6NHZ5 514 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 ANKRD66B4E2M5 251 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 H3BNX3 289 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 EI24O14681 340 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 KDM1AO60341 852 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 UGT2B4P06133 528 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 SPAM1P38567 509 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 MAGEA11P43364 429 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 TTC30BQ8N4P2 665 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 EEF1AKMT1Q8WVE0 214 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 KCTD5Q9NXV2 234 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 CPQQ9Y646 472 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 SQORQ9Y6N5 450 aa18.34■□□□□ 0.53
USP48-204ENST00000400301 G3V2T6 193 aa18.33■□□□□ 0.53
USP48-204ENST00000400301 ARPC2O15144 300 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms