RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PRG3Q9Y2Y8 225 aaPredicted RBP25.34■■□□□ 1.65
COL13A1-203ENST00000398969 TYW5A2RUC4 315 aaKnown RBP25.34■■□□□ 1.65
COL13A1-203ENST00000398969 CLOCKO15516 846 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 SNX2O60749 519 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 MLYCDO95822 493 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 C1RP00736 705 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 CES1P23141 567 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 SOX11P35716 441 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 OR1G1P47890 313 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 POLR2JP52435 117 aaKnown RBP25.34■■□□□ 1.65
COL13A1-203ENST00000398969 PDCD4Q53EL6 469 aaKnown RBP25.34■■□□□ 1.65
COL13A1-203ENST00000398969 TXNDC11Q6PKC3 985 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 GLT6D1Q7Z4J2 308 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 TBC1D21Q8IYX1 336 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 ACOX2Q99424 681 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 SMPD3Q9NY59 655 aaPredicted RBP25.34■■□□□ 1.65
COL13A1-203ENST00000398969 FADS3Q9Y5Q0 445 aa25.34■■□□□ 1.65
COL13A1-203ENST00000398969 ZFC3H1O60293 1989 aaKnown RBP25.33■■□□□ 1.65
COL13A1-203ENST00000398969 TMEM189-UBE2V1I3L0A0 370 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 UMPSP11172 480 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 CASP2P42575 452 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 VEGFBP49765 207 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 CDKN1CP49918 316 aaPredicted RBP25.33■■□□□ 1.65
COL13A1-203ENST00000398969 RING1Q06587 406 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 RBBP7Q16576 425 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 PTPRNQ16849 979 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 TIGD2Q4W5G0 525 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 ACBD5Q5T8D3 534 aaPredicted RBP25.33■■□□□ 1.65
COL13A1-203ENST00000398969 GPR180Q86V85 440 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 COLGALT2Q8IYK4 626 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 MDGA1Q8NFP4 955 aa25.33■■□□□ 1.65
COL13A1-203ENST00000398969 NPLQ9BXD5 320 aaPredicted RBP25.33■■□□□ 1.65
COL13A1-203ENST00000398969 hCG_2014768A0A024R1R8 64 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 KANSL1LA0AUZ9 987 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 ZNF701M0R085 212 aaPredicted RBP25.33■■□□□ 1.64
COL13A1-203ENST00000398969 TSPAN12O95859 305 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 PYGLP06737 847 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 CAPGP40121 348 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 RGRP47804 291 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 ADARP55265 1226 aaKnown RBP25.33■■□□□ 1.64
COL13A1-203ENST00000398969 ERVK-8P63133 956 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 TBC1D25Q3MII6 688 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 AASDHQ4L235 1098 aaPredicted RBP25.33■■□□□ 1.64
COL13A1-203ENST00000398969 CLLU1OSQ5K130 101 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 NANOGP8Q6NSW7 305 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 SLC24A5Q71RS6 500 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 LGI2Q8N0V4 545 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 GFM2Q969S9 779 aaKnown RBP25.33■■□□□ 1.64
COL13A1-203ENST00000398969 RMDN1Q96DB5 314 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 NANOGQ9H9S0 305 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 INTS7Q9NVH2 962 aaKnown RBP25.33■■□□□ 1.64
COL13A1-203ENST00000398969 USP22Q9UPT9 525 aa25.33■■□□□ 1.64
COL13A1-203ENST00000398969 EOMESO95936 686 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 VARSP26640 1264 aaKnown RBP25.32■■□□□ 1.64
COL13A1-203ENST00000398969 IL12AP29459 219 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 TAF1AQ15573 450 aaPredicted RBP25.32■■□□□ 1.64
COL13A1-203ENST00000398969 CYBRD1Q53TN4 286 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 ABRAXAS1Q6UWZ7 409 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 OFCC1Q8IZS5 231 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 BBS5Q8N3I7 341 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 DHRSXQ8N5I4 330 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 OR7D4Q8NG98 312 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 ZNF296Q8WUU4 475 aaPredicted RBP25.32■■□□□ 1.64
COL13A1-203ENST00000398969 ESAMQ96AP7 390 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 C12orf43Q96C57 262 aaKnown RBP25.32■■□□□ 1.64
COL13A1-203ENST00000398969 RPF2Q9H7B2 306 aaKnown RBP25.32■■□□□ 1.64
COL13A1-203ENST00000398969 FKTNO75072 461 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 HRH2P25021 359 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 RPS9P46781 194 aaKnown RBP25.32■■□□□ 1.64
COL13A1-203ENST00000398969 GALK1P51570 392 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 HK3P52790 923 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 NUP107P57740 925 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 CTXN3Q4LDR2 81 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 PATL1Q86TB9 770 aaKnown RBP25.32■■□□□ 1.64
COL13A1-203ENST00000398969 EGFL6Q8IUX8 553 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 OR56A4Q8NGH8 313 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 LINC01599Q8WXQ3 324 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 SMIM14Q96QK8 99 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 SEZ6LQ9BYH1 1024 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 CCSER2Q9H7U1 834 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 ZIM2Q9NZV7 527 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 SEPT3Q9UH03 358 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 SUN2Q9UH99 717 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 ASB1Q9Y576 335 aa25.32■■□□□ 1.64
COL13A1-203ENST00000398969 FAM234BA2RU67 622 aa25.31■■□□□ 1.64
COL13A1-203ENST00000398969 F5H5T6 163 aa25.31■■□□□ 1.64
COL13A1-203ENST00000398969 ARVCFO00192 962 aa25.31■■□□□ 1.64
COL13A1-203ENST00000398969 SNAP91O60641 907 aa25.31■■□□□ 1.64
COL13A1-203ENST00000398969 FXNQ16595 210 aa25.31■■□□□ 1.64
COL13A1-203ENST00000398969 SIDT2Q8NBJ9 832 aaKnown RBP25.31■■□□□ 1.64
COL13A1-203ENST00000398969 MAGEE2Q8TD90 523 aaPredicted RBP25.31■■□□□ 1.64
COL13A1-203ENST00000398969 BIRC7Q96CA5 298 aa25.31■■□□□ 1.64
COL13A1-203ENST00000398969 PSKH2Q96QS6 385 aa25.31■■□□□ 1.64
COL13A1-203ENST00000398969 ZBED2Q9BTP6 218 aa25.31■■□□□ 1.64
COL13A1-203ENST00000398969 CDC14AQ9UNH5 594 aa25.31■■□□□ 1.64
COL13A1-203ENST00000398969 SLC27A5Q9Y2P5 690 aa25.31■■□□□ 1.64
COL13A1-203ENST00000398969 NIPSNAP2O75323 286 aa25.3■■□□□ 1.64
COL13A1-203ENST00000398969 VPS26AO75436 327 aa25.3■■□□□ 1.64
COL13A1-203ENST00000398969 LDLRP01130 860 aa25.3■■□□□ 1.64
COL13A1-203ENST00000398969 HTR1EP28566 365 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms