RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 EPHX1P07099 455 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 SLC6A2P23975 617 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 SOX4Q06945 474 aaPredicted RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 SIRPB2Q5JXA9 342 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 B3GNT6Q6ZMB0 384 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 AGMOQ6ZNB7 445 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 EIF3MQ7L2H7 374 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 BPIFB6Q8NFQ5 453 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 PHF10Q8WUB8 498 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 NACC2Q96BF6 587 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 DGCR6LQ9BY27 220 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 PAIP1Q9H074 479 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 ABCB8Q9NUT2 735 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 DUS2Q9NX74 493 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 SAMD4AQ9UPU9 718 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 ABHD14A-ACY1A0A1B0GW23 586 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 SUV39H1O43463 412 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 DNAJA2O60884 412 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 PDE9AO76083 593 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 AHSGP02765 367 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 IMPDH1P20839 514 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 ACVRL1P37023 503 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 TIMM50Q3ZCQ8 353 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 KHDC1Q4VXA5 237 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 SNX20Q7Z614 316 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 CTU1Q7Z7A3 348 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 MRPS26Q9BYN8 205 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 HAPLN2Q9GZV7 340 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 FAM53CQ9NYF3 392 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 NDOR1Q9UHB4 597 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 TBC1D3DA0A087WVF3 549 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TBC1D3IA0A087WXS9 549 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TBC1D3EA0A087X179 549 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TBC1D3KA0A087X1G2 549 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 MTMR11A4FU01 709 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TBC1D3FA6NER0 549 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 CAPN8A6NHC0 703 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TBC1D3LB9A6J9 549 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 DLGAP3O95886 979 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 C8GP07360 202 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TBC1D3HP0C7X1 549 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 HAPLN1P10915 354 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 AMD1P17707 334 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 DGKGP49619 791 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 REP15Q6BDI9 236 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TBC1D3GQ6DHY5 549 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TBC1D3CQ6IPX1 549 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 CNKSR3Q6P9H4 555 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 PAQR3Q6TCH7 311 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TBC1D3Q8IZP1 549 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 DPP10Q8N608 796 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 IMP3Q9NV31 184 aaKnown RBP14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 ABLIM1O14639 778 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 ASLP04424 464 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 VAV1P15498 845 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 DNAJB1P25685 340 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 NRG1Q02297 640 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 LIPEQ05469 1076 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TRIM25Q14258 630 aaKnown RBP14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 UPP1Q16831 310 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 FAM182AQ5T1J6 154 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 NAIF1Q69YI7 327 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 ERICH5Q6P6B1 374 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 DEPDC4Q8N2C3 294 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 MYOCQ99972 504 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 TDRD1Q9BXT4 1180 aaKnown RBP14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 USP29Q9HBJ7 922 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 CYTH4Q9UIA0 394 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 SLC9A8Q9Y2E8 581 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 MFHAS1Q9Y4C4 1052 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 MYL12BO14950 172 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 GPR32O75388 356 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 SERPINB7O75635 380 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 PRPS2P11908 318 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 RGS1Q08116 209 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 CHIT1Q13231 466 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 SERINC3Q13530 473 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 MS4A13Q5J8X5 152 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 ATAT1Q5SQI0 421 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 GET4Q7L5D6 327 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 SPPL2CQ8IUH8 684 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 COLGALT2Q8IYK4 626 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 ZNF461Q8TAF7 563 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 SH3RF2Q8TEC5 729 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 SLC2A13Q96QE2 648 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 POLR1BQ9H9Y6 1135 aa14.09□□□□□ -0.15
PCDHGA11-201ENST00000398587 EIF2S1P05198 315 aaKnown RBP14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 SSR2P43308 183 aa14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 WNT7BP56706 349 aa14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 HERVK_113P63132 956 aa14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 DGUOKQ16854 277 aa14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 MTX3Q5HYI7 312 aa14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 CAND1Q86VP6 1230 aaKnown RBP14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 CCDC103Q8IW40 242 aa14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 SMG8Q8ND04 991 aaKnown RBP14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 TSGA13Q96PP4 275 aa14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 KIFC1Q9BW19 673 aa14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 ERVK-6Q9BXR3 956 aa14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 CLK4Q9HAZ1 481 aaKnown RBP14.08□□□□□ -0.15
PCDHGA11-201ENST00000398587 A0A1W2PRU2 124 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms