RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 DCAF12Q5T6F0 453 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 HENMT1Q5T8I9 393 aaKnown RBP9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 IYDQ6PHW0 289 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 ATG14Q6ZNE5 492 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 LUZP1Q86V48 1076 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 PTRH1Q86Y79 214 aaKnown RBP9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 PQLC3Q8N755 202 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 BMPERQ8N8U9 685 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 CCNYQ8ND76 341 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 NCSTNQ92542 709 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 COL26A1Q96A83 441 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 RNF31Q96EP0 1072 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 TSGA13Q96PP4 275 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 ZNF670Q9BS34 389 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 DDA1Q9BW61 102 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 FAM83DQ9H4H8 585 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 CBX8Q9HC52 389 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 GEMIN8Q9NWZ8 242 aaKnown RBP9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 CTTNBP2NLQ9P2B4 639 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 PDP2Q9P2J9 529 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 KLHL3Q9UH77 587 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 DNPEPQ9ULA0 475 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 CAPN11Q9UMQ6 739 aa9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 ZNF106Q9H2Y7 1883 aaKnown RBP9.7□□□□□ -0.86
NIFKP1-201ENST00000398317 KCNK1O00180 336 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 NKX2-8O15522 239 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 ARHGAP6O43182 974 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 PPFIA2O75334 1257 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 PROSCO94903 275 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 SFTPCP11686 197 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 CA4P22748 312 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 RPL26P61254 145 aaKnown RBP9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 GALNT3Q14435 633 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 PDK2Q15119 407 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 ZFYVE27Q5T4F4 411 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 ALS2CLQ60I27 953 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 BORAQ6PGQ7 559 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 WDR74Q6RFH5 385 aaPredicted RBP9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 KDELC2Q7Z4H8 507 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 ARHGAP22Q7Z5H3 698 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 CCDC13Q8IYE1 715 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 UNC5BQ8IZJ1 945 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 RAPGEF5Q92565 580 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 FATE1Q969F0 183 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 FAF2Q96CS3 445 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 EID2BQ96D98 161 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 RTP4Q96DX8 246 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 LYSMD1Q96S90 227 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 MLPHQ9BV36 600 aaPredicted RBP9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 TBC1D10AQ9BXI6 508 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 PACSIN1Q9BY11 444 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 CEP41Q9BYV8 373 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 ASPSCR1Q9BZE9 553 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 BRD8Q9H0E9 1235 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 SLC25A18Q9H1K4 315 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 APMAPQ9HDC9 416 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 SARS2Q9NP81 518 aaKnown RBP9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 PRDM8Q9NQV8 689 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 DTLQ9NZJ0 730 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 PKD2L2Q9NZM6 624 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 VPS18Q9P253 973 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 ATXN10Q9UBB4 475 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 AMACRQ9UHK6 382 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 PILRAQ9UKJ1 303 aa9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 RPL26L1Q9UNX3 145 aaKnown RBP9.69□□□□□ -0.86
NIFKP1-201ENST00000398317 LOC101059948A0A1B0GTJ6 334 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 SYCE3A1L190 88 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 A6NCN8 305 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 ANKRD66B4E2M5 251 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 GRID2O43424 1007 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 NUAK1O60285 661 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 SLC4A1P02730 911 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 GYPCP04921 128 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 PIRTP0C851 137 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 PRKAR1AP10644 381 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 ZNF8P17098 575 aaPredicted RBP9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 KDELR1P24390 212 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 POLE2P56282 527 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 MC2RQ01718 297 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 ZBTB17Q13105 803 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 PLA2G4EQ3MJ16 856 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 SAMD5Q5TGI4 173 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 CEACAM20Q6UY09 585 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 B4GALNT4Q76KP1 1039 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 TIPARPQ7Z3E1 657 aaKnown RBP9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 SLC9B2Q86UD5 537 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 MAP7D3Q8IWC1 876 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 CNTD1Q8N815 330 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 CCHCR1Q8TD31 782 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 HDAC11Q96DB2 347 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 HERPUD2Q9BSE4 406 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 SPATA16Q9BXB7 569 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 SPRY4Q9C004 299 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 OR2AG1Q9H205 316 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 OSGEPL1Q9H4B0 414 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 STN1Q9H668 368 aaKnown RBP9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 RMI1Q9H9A7 625 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 KLC4Q9NSK0 619 aa9.68□□□□□ -0.86
NIFKP1-201ENST00000398317 HAUS2Q9NVX0 235 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms