RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TPD52L2O43399 206 aaKnown RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 WARSP23381 471 aaKnown RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 PSME3P61289 254 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 RPS24P62847 133 aaKnown RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 PURAQ00577 322 aaKnown RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 RALGPS2Q86X27 583 aaPredicted RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 PIH1D2Q8WWB5 315 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 RCN3Q96D15 328 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 WDR26Q9H7D7 661 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 WNT6Q9Y6F9 365 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 A0A0G2JN53 185 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 STX11O75558 287 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 LYPLA2O95372 231 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 ACP5P13686 325 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 KAT2AQ92830 837 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 SNHG28P0DPA3 235 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 CCNCP24863 283 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 ICAM3P32942 547 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 RDH11Q8TC12 318 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 SIPA1Q96FS4 1042 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 IPPKQ9H8X2 491 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 SLIT3O75094 1523 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 FGF18O76093 207 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 TNK2Q07912 1038 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 PPM1JQ5JR12 505 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 ANO7Q6IWH7 933 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 PIWIL4Q7Z3Z4 852 aaKnown RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 EEF1AKMT1Q8WVE0 214 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 MTX2O75431 263 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 PDE9AO76083 593 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 RPL10P27635 214 aaKnown RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 TEAD2Q15562 447 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 ZNF483Q8TF39 744 aaPredicted RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 BATF3Q9NR55 127 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 MAGEB3O15480 346 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 LRCH4O75427 683 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 DDX6P26196 483 aaKnown RBP eCLIP11.26□□□□□ -0.61
TTC28-201ENST00000397906 GABRB2P47870 512 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 ARCN1P48444 511 aaKnown RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 HTRA3P83110 453 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 MED27Q6P2C8 311 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 HNRNPABQ99729 332 aaKnown RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 IKZF2Q9UKS7 526 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 YJEFN3A6XGL0 299 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 E7ENQ6 273 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 ECDO95905 644 aaPredicted RBP11.25□□□□□ -0.61
TTC28-201ENST00000397906 ASPAP45381 313 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 ARF5P84085 180 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 SLC34A1Q06495 639 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 PCDH1Q08174 1060 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 RNASE12Q5GAN4 147 aaKnown RBP11.25□□□□□ -0.61
TTC28-201ENST00000397906 OR5M3Q8NGP4 307 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 MCUBQ9NWR8 336 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 COL14A1Q05707 1796 aaKnown RBP11.25□□□□□ -0.61
TTC28-201ENST00000397906 ZNF296Q8WUU4 475 aaPredicted RBP11.25□□□□□ -0.61
TTC28-201ENST00000397906 A0A0J9YYE9 177 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 KCNA5P22460 613 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 MMP8P22894 467 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 ITGA1P56199 1179 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 LGALS3BPQ08380 585 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 SLC10A6Q3KNW5 377 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 SPANXN2Q5MJ10 180 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 ZNF567Q8N184 647 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 GHDCQ8N2G8 530 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 MAGEH1Q9H213 219 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 EPB41L1Q9H4G0 881 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 MIOSQ9NXC5 875 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 SLC17A7Q9P2U7 560 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 ROBO3Q96MS0 1386 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 FAM92AA1XBS5 289 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 C9JVG2 144 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 AHCYP23526 432 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 PTCHD4Q6ZW05 846 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 RP9Q8TA86 221 aaKnown RBP11.25□□□□□ -0.61
TTC28-201ENST00000397906 DTNBP1Q96EV8 351 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 EBF3Q9H4W6 596 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 SLC35C2Q9NQQ7 365 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 ADGRE2Q9UHX3 823 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 YIPF1Q9Y548 306 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 MED26O95402 600 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 ALPIP09923 528 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 CCKBRP32239 447 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 SH3PXD2AQ5TCZ1 1133 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 ANKRD46Q86W74 232 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 FAM46DQ8NEK8 389 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 FAM110BQ8TC76 370 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 PDCD10Q9BUL8 212 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 SPATA9Q9BWV2 254 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 ERVK-5Q9HDB9 667 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 CMTM6Q9NX76 183 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 AP3M1Q9Y2T2 418 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 LMO7Q8WWI1 1683 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 FAM25EA8MYX2 175 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 STK16O75716 305 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 LARS2Q15031 903 aaKnown RBP11.25□□□□□ -0.61
TTC28-201ENST00000397906 NOMO1Q15155 1222 aa11.25□□□□□ -0.61
TTC28-201ENST00000397906 TTMPQ5BVD1 217 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms