RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 EMP3P54852 163 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF33BQ06732 778 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 DLG2Q15700 870 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TMEM214Q6NUQ4 689 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 RRM2BQ7LG56 351 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 UBE2Q1Q7Z7E8 422 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 KRT73Q86Y46 540 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TTC30BQ8N4P2 665 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 FIBCD1Q8N539 461 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 OR8H1Q8NGG4 311 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TRAPPC12Q8WVT3 735 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 METTL2AQ96IZ6 378 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SENP8Q96LD8 212 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 UROC1Q96N76 676 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TINF2Q9BSI4 451 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 RMND5AQ9H871 391 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SEMA4BQ9NPR2 832 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ABCC13Q9NSE7 274 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SMPD3Q9NY59 655 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 BTRCQ9Y297 605 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TNPO3Q9Y5L0 923 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 KCNH1O95259 989 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 NTRK1P04629 796 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CDK4P11802 303 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SLC2A4P14672 509 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 POLR2EP19388 210 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CHRM3P20309 590 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 AZGP1P25311 298 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ADRA1AP35348 466 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SOAT1P35610 550 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TMBIM6P55061 237 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 OR2B6P58173 313 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TRIM32Q13049 653 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 REP15Q6BDI9 236 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF470Q6ECI4 717 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SPATA19Q7Z5L4 167 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TEX26Q8N6G2 289 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 FNDC5Q8NAU1 212 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 COPS4Q9BT78 406 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF624Q9P2J8 865 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 LEF1Q9UJU2 399 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 YJEFN3A6XGL0 299 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 NOS1APO75052 506 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CYP7B1O75881 506 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ATXN8OSP0DMR3 200 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 C4BPBP20851 252 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 RPS9P46781 194 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MS4A2Q01362 244 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 DDI2Q5TDH0 399 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MZT2BQ6NZ67 158 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 KDELC1Q6UW63 502 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 C14orf80Q86SX3 495 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MON1AQ86VX9 555 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ARHGAP12Q8IWW6 846 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SLC7A5P1Q8MH63 180 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SMOQ99835 787 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 FAIMQ9NVQ4 179 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 INTS10Q9NVR2 710 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 VPS51Q9UID3 782 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CDV3Q9UKY7 258 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SIP14410 1827 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 AZIN1O14977 448 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 TBX1O43435 398 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 CST1P01037 141 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 MVKQ03426 396 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 PPM1JQ5JR12 505 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 PITRM1Q5JRX3 1037 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 COLEC12Q5KU26 742 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 UBXN11Q5T124 520 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF544Q6NX49 715 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 CERS6Q6ZMG9 384 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 FBXO16Q8IX29 292 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-205ENST00000397611 FAM126BQ8IXS8 530 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 MINDY2Q8NBR6 621 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 KIAA1191Q96A73 305 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 CCDC115Q96NT0 180 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 TRIM8Q9BZR9 551 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 MTIF3Q9H2K0 278 aaKnown RBP5.4□□□□□ -1.54
PTPRD-205ENST00000397611 PCDHGB1Q9Y5G3 927 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 OAS3Q9Y6K5 1087 aaKnown RBP5.4□□□□□ -1.54
PTPRD-205ENST00000397611 TTC24A2A3L6 582 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-205ENST00000397611 PRR35P0CG20 571 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 CD68P34810 354 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-205ENST00000397611 RFC2P35250 354 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 RAD51Q06609 339 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 RCAN2Q14206 197 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 POU6F1Q14863 301 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 C5orf22Q49AR2 442 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 FAM131AQ6UXB0 335 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 CYHR1Q6ZMK1 362 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 PLD6Q8N2A8 252 aaKnown RBP5.4□□□□□ -1.54
PTPRD-205ENST00000397611 TADA1Q96BN2 335 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 TBC1D20Q96BZ9 403 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 GINS4Q9BRT9 223 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 WDCPQ9H6R7 721 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 RABL2AQ9UBK7 228 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-205ENST00000397611 ADAM30Q9UKF2 790 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 ING4Q9UNL4 249 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 HSPE1-MOB4S4R3N1 261 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 ATP6AP2A0A1C7CYW4 349 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms