RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 PTCRAQ6ISU1 281 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 LAYNQ6UX15 382 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 ZC3HC1Q86WB0 502 aaKnown RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 IFNEQ86WN2 208 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 CILP2Q8IUL8 1156 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 NXPE1Q8N323 547 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 OR10G6Q8NH81 332 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 ECSITQ9BQ95 431 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 SLC2A4RGQ9NR83 387 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 TMEM30AQ9NV96 361 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 FAM92AA1XBS5 289 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 E2F6O75461 281 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 AP2A2O94973 939 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 ALPPL2P10696 532 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 IL10P22301 178 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 GJA4P35212 333 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 HMGCLP35914 325 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 INPP5AQ14642 412 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 RANBP10Q6VN20 620 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 SCRN2Q96FV2 425 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 CCM2Q9BSQ5 444 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 THUMPD3Q9BV44 507 aaKnown RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 TFB2MQ9H5Q4 396 aaKnown RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 IL37Q9NZH6 218 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 CCL26Q9Y258 94 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 RGSL1A5PLK6 1076 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 SLC28A1O00337 649 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 RECQL5O94762 991 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 BMP10O95393 424 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 AHSGP02765 367 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 ITGB8P26012 769 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 NDUFS1P28331 727 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 OXTRP30559 389 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 ACTR1BP42025 376 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 DHPSP49366 369 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 NME5P56597 212 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 ACTR1AP61163 376 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 TNK2Q07912 1038 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 ZNF234Q14588 700 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 GPRC6AQ5T6X5 926 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 ZYG11AQ6WRX3 759 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 PAGE2Q7Z2X7 111 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 UNC5BQ8IZJ1 945 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 MIER2Q8N344 545 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 RERGQ96A58 199 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 THTPAQ9BU02 230 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 IL1RL2Q9HB29 575 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 NUMBLQ9Y6R0 609 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 NR5A2O00482 541 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 NIPSNAP2O75323 286 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 HLA-FP30511 346 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 GNPDA1P46926 289 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 CDH13P55290 713 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 DAB2P98082 770 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 NFATC2Q13469 925 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 SLC14A2Q15849 920 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 CPSF6Q16630 551 aaKnown RBP eCLIP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 PGS1Q32NB8 556 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 TMEM135Q86UB9 458 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 FSTL5Q8N475 847 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 TRAM1L1Q8N609 369 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 DCAKDQ8WVC6 231 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 MCCC1Q96RQ3 725 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 AARSD1Q9BTE6 412 aaKnown RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 RAB11FIP5Q9BXF6 653 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 SH3BP4Q9P0V3 963 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 IGLV3-10A0A075B6K4 115 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 RASSF9O75901 435 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CBSLP0DN79 551 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 HGFP14210 728 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 HNRNPLP14866 589 aaKnown RBP eCLIP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CALB2P22676 271 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CBSP35520 551 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 SLC26A3P40879 764 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CSNK1DP48730 415 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 PRIM2P49643 509 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 AP2B1P63010 937 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 NAE1Q13564 534 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 TSNQ15631 228 aaKnown RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CYS1Q717R9 158 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 ADGRG2Q8IZP9 1017 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 TRIML2Q8N7C3 387 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 AVL9Q8NBF6 648 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 TLCD1Q96CP7 247 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 MSANTD3Q96H12 275 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 ASB16Q96NS5 453 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CATSPER2Q96P56 530 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 GPR22Q99680 433 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 AIF1LQ9BQI0 150 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 MECRQ9BV79 373 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CCDC177Q9NQR7 707 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 ANLNQ9NQW6 1124 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 TAGLN3Q9UI15 199 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CXorf49A8MYA2 514 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 FFAR3O14843 346 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 KMOO15229 486 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 GPR42O15529 346 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 ZNF217O75362 1048 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 MTX2O75431 263 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 ANXA6P08133 673 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms