RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 USP36Q9P275 1121 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-204ENST00000397404 KRBA1A5PL33 1030 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 FAM170BA6NMN3 283 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 PHGDHO43175 533 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 OR1I1O60431 355 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 SLC25A14O95258 325 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 PRSS56P0CW18 603 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 CCDC166P0CW27 439 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 BMP1P13497 986 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 NDUFV2P19404 249 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 DGKAP23743 735 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 WDR4P57081 412 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 SEMG2Q02383 582 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 LRRC14Q15048 493 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 PPM1JQ5JR12 505 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 ATG16L1Q676U5 607 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 RAET1GQ6H3X3 334 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 SPEM1Q8N4L4 309 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 CAMKK1Q8N5S9 505 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 CCDC63Q8NA47 563 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 LRRC8CQ8TDW0 803 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 TFB2MQ9H5Q4 396 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 CD84Q9UIB8 345 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 GPR34Q9UPC5 381 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 RUVBL2Q9Y230 463 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 UNC80Q8N2C7 3258 aa18.81■□□□□ 0.6
TSPAN4-204ENST00000397404 PROCP04070 461 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 HOXC4P09017 264 aaPredicted RBP18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 GABRG2P18507 467 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 TAC1P20366 129 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 CD72P21854 359 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 GRK2P25098 689 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 CLCN7P51798 805 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 GYS2P54840 703 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 GTF2H3Q13889 308 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 KIAA1324Q6UXG2 1013 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 CDHR3Q6ZTQ4 885 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 SIX5Q8N196 739 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 ACVR1CQ8NER5 493 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 TSTD1Q8NFU3 115 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 FAM174AQ8TBP5 190 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 MGARPQ8TDB4 240 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 ASB2Q96Q27 587 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 GPR21Q99679 349 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 PAIP2Q9BPZ3 127 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 SLC17A9Q9BYT1 436 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 NSRP1Q9H0G5 558 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 EPN3Q9H201 632 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 CHRDQ9H2X0 955 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 TRIM39Q9HCM9 518 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 COPG2Q9UBF2 871 aa18.8■□□□□ 0.6
TSPAN4-204ENST00000397404 ANTXRLA6NF34 631 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 IGLON5A6NGN9 336 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 SYCE1LA8MT33 242 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 FADS2P1A8MWK0 482 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 TRIM23P36406 574 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 TPMTP51580 245 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 PLEKHS1Q5SXH7 462 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 PNCKQ6P2M8 343 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 OTOAQ7RTW8 1153 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 ARMC2Q8NEN0 867 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 STAG3L4Q8TBR4 150 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 CD200R1Q8TD46 325 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 CHMP6Q96FZ7 201 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 HIC2Q96JB3 615 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 PCED1AQ9H1Q7 454 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 PRDM6Q9NQX0 595 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 SIRPGQ9P1W8 387 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 SLC17A7Q9P2U7 560 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 SERGEFQ9UGK8 458 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 MED16Q9Y2X0 877 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 DNMT3AQ9Y6K1 912 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 PRUNE2Q8WUY3 3088 aa18.79■□□□□ 0.6
TSPAN4-204ENST00000397404 TBC1D3DA0A087WVF3 549 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TBC1D3IA0A087WXS9 549 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TBC1D3EA0A087X179 549 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TBC1D3KA0A087X1G2 549 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 GMNCA6NCL1 334 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TBC1D3FA6NER0 549 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TBC1D3LB9A6J9 549 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 RNGTTO60942 597 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 BPGMP07738 259 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TBC1D3HP0C7X1 549 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 NEFHP12036 1026 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TIAL1Q01085 375 aaKnown RBP eCLIP18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TMEM115Q12893 351 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 BCL7AQ4VC05 210 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TBC1D3GQ6DHY5 549 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TBC1D3CQ6IPX1 549 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 RFLNAQ6ZTI6 216 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 NEK10Q6ZWH5 1172 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 NUDCD3Q8IVD9 361 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 SLC22A9Q8IVM8 553 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 HOMEZQ8IX15 550 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 TBC1D3Q8IZP1 549 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 KIRREL3Q8IZU9 778 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 PJA1Q8NG27 643 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 GRAMD1AQ96CP6 724 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 COX14Q96I36 57 aa18.78■□□□□ 0.6
TSPAN4-204ENST00000397404 GPR78Q96P69 363 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms