RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 TCF4P15884 667 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 CCND3P30281 292 aaPredicted RBP8.36□□□□□ -1.07
NDE1-202ENST00000396355 ADCYAP1R1P41586 468 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 CACNB2Q08289 660 aaPredicted RBP8.36□□□□□ -1.07
NDE1-202ENST00000396355 C2orf80Q0P641 193 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 GALNT3Q14435 633 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 FLYWCH1Q4VC44 716 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 ESCO2Q56NI9 601 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 RNASE12Q5GAN4 147 aaKnown RBP8.36□□□□□ -1.07
NDE1-202ENST00000396355 SAMD4BQ5PRF9 694 aaKnown RBP8.36□□□□□ -1.07
NDE1-202ENST00000396355 NOL9Q5SY16 702 aaKnown RBP8.36□□□□□ -1.07
NDE1-202ENST00000396355 FIP1L1Q6UN15 594 aaKnown RBP8.36□□□□□ -1.07
NDE1-202ENST00000396355 KBTBD6Q86V97 674 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 CHSY1Q86X52 802 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 ZNF677Q86XU0 584 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 MCOLN2Q8IZK6 566 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 ATG16L2Q8NAA4 619 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 NDNFQ8TB73 568 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 NANPQ8TBE9 248 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 MCOLN3Q8TDD5 553 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 TRIB2Q92519 343 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 SGTBQ96EQ0 304 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 PFDN5Q99471 154 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 NTPCRQ9BSD7 190 aaKnown RBP8.36□□□□□ -1.07
NDE1-202ENST00000396355 CHIAQ9BZP6 476 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 PORCNQ9H237 461 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 OSGEPL1Q9H4B0 414 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 IFT46Q9NQC8 304 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 NIT2Q9NQR4 276 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 RAPGEFL1Q9UHV5 662 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 FNDC3AQ9Y2H6 1198 aaKnown RBP8.36□□□□□ -1.07
NDE1-202ENST00000396355 PLLPQ9Y342 182 aa8.36□□□□□ -1.07
NDE1-202ENST00000396355 SCAMP2O15127 329 aaKnown RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 UBDO15205 165 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 INMTO95050 263 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 F7P08709 466 aaPredicted RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 CD36P16671 472 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 MPSTP25325 297 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 FMO3P31513 532 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 CSKP41240 450 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 TAS2R40P59535 323 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 SNTA1Q13424 505 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 NFYCQ13952 458 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 PPM1JQ5JR12 505 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 TDRD10Q5VZ19 366 aaKnown RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 GLYATQ6IB77 296 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 ZCCHC12Q6PEW1 402 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 CDHR3Q6ZTQ4 885 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 AHSA2Q719I0 299 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 LRRC8DQ7L1W4 858 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 THAP5Q7Z6K1 395 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 KRT78Q8N1N4 520 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 METTL4Q8N3J2 472 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 MPP5Q8N3R9 675 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 BPIFB1Q8TDL5 484 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 PTERQ96BW5 349 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 ATG4CQ96DT6 458 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 OR52B2Q96RD2 323 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 ACSS3Q9H6R3 686 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 APOBEC3GQ9HC16 384 aaKnown RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 PRDM8Q9NQV8 689 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 SH3BP4Q9P0V3 963 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 TSR3Q9UJK0 312 aaKnown RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 CNOT11Q9UKZ1 510 aaKnown RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 CNOT6Q9ULM6 557 aaKnown RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 BPTFQ12830 3046 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 PER2O15055 1255 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 GLRA3O75311 464 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 VNN1O95497 513 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 PRKCGP05129 697 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 FDX1P10109 184 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 HDCP19113 662 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 NUP62P37198 522 aaPredicted RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 CDH6P55285 790 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 GRSF1Q12849 480 aaKnown RBP eCLIP8.35□□□□□ -1.07
NDE1-202ENST00000396355 FSCN1Q16658 493 aaKnown RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 SLC9B1Q4ZJI4 515 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 TOR2AQ5JU69 321 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 CACHD1Q5VU97 1274 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 AGAP6Q5VW22 663 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 ANKRD22Q5VYY1 191 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 TIGD7Q6NT04 549 aaPredicted RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 ZNF600Q6ZNG1 722 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 MON1BQ7L1V2 547 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 LILRA2Q8N149 483 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 STX19Q8N4C7 294 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 ZNF781Q8N8C0 355 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 FAM83FQ8NEG4 500 aaPredicted RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 HCAR2Q8TDS4 363 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 DENND1AQ8TEH3 1009 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 ZC3H10Q96K80 434 aaKnown RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 AGAP4Q96P64 663 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 THUMPD3Q9BV44 507 aaKnown RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 RANBP3Q9H6Z4 567 aaPredicted RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 IL1RAPQ9NPH3 570 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 KRT84Q9NSB2 600 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 MAFFQ9ULX9 164 aa8.35□□□□□ -1.07
NDE1-202ENST00000396355 PPIEQ9UNP9 301 aaKnown RBP8.35□□□□□ -1.07
NDE1-202ENST00000396355 PHIPQ8WWQ0 1821 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms