RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ZCCHC2Q9C0B9 1178 aaKnown RBP30.31■■■□□ 2.44
CMTM4-202ENST00000394106 SEMA6CQ9H3T2 930 aa30.31■■■□□ 2.44
CMTM4-202ENST00000394106 ARNT2Q9HBZ2 717 aa30.31■■■□□ 2.44
CMTM4-202ENST00000394106 ASCL3Q9NQ33 180 aa30.31■■■□□ 2.44
CMTM4-202ENST00000394106 THSD1Q9NS62 852 aa30.31■■■□□ 2.44
CMTM4-202ENST00000394106 FEZ2Q9UHY8 353 aaPredicted RBP30.31■■■□□ 2.44
CMTM4-202ENST00000394106 CFAP47Q6ZTR5 3102 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 A6NCN8 305 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 RRP8O43159 456 aaKnown RBP30.3■■■□□ 2.44
CMTM4-202ENST00000394106 TNFSF15O95150 251 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 IFNB1P01574 187 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 CD1CP29017 333 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 STIP1P31948 543 aaKnown RBP30.3■■■□□ 2.44
CMTM4-202ENST00000394106 CLCNKAP51800 687 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 PDE1BQ01064 536 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 HHEXQ03014 270 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 ZFP36L1Q07352 338 aaKnown RBP30.3■■■□□ 2.44
CMTM4-202ENST00000394106 NFATC2Q13469 925 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 OASLQ15646 514 aaKnown RBP30.3■■■□□ 2.44
CMTM4-202ENST00000394106 GPRC6AQ5T6X5 926 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 LRRC69Q6ZNQ3 347 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 FBXO39Q8N4B4 442 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 DDHD1Q8NEL9 900 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 OR13C4Q8NGS5 318 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 RTP4Q96DX8 246 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 SLC46A1Q96NT5 459 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 TIMM29Q9BSF4 260 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 ZMYND15Q9H091 742 aa30.3■■■□□ 2.44
CMTM4-202ENST00000394106 STN1Q9H668 368 aaKnown RBP30.3■■■□□ 2.44
CMTM4-202ENST00000394106 IGHV1OR21-1A0A087WYE8 117 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 PLD2O14939 933 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 TPH1P17752 444 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 ERVPABLB-1P60509 514 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 CCDC173Q0VFZ6 552 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 SEPT7Q16181 437 aaKnown RBP30.29■■■□□ 2.44
CMTM4-202ENST00000394106 COL28A1Q2UY09 1125 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 CHCHD2P9Q5T1J5 151 aaPredicted RBP30.29■■■□□ 2.44
CMTM4-202ENST00000394106 SLC9B2Q86UD5 537 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 SLITRK4Q8IW52 837 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 RASGEF1AQ8N9B8 481 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 SARS2Q9NP81 518 aaKnown RBP30.29■■■□□ 2.44
CMTM4-202ENST00000394106 PIH1D1Q9NWS0 290 aaKnown RBP30.29■■■□□ 2.44
CMTM4-202ENST00000394106 LHX6Q9UPM6 363 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 ADAMTS20P59510 1910 aa30.29■■■□□ 2.44
CMTM4-202ENST00000394106 KIR2DS5A0A0G2JLQ3 304 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 A0A0G2JNG1 304 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 KIR2DS3K7RE56 304 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 PSMD3O43242 534 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 SRP72O76094 671 aaKnown RBP30.28■■■□□ 2.44
CMTM4-202ENST00000394106 AP2A1O95782 977 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 HGFP14210 728 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 AKT1P31749 480 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 ZNF140P52738 457 aaPredicted RBP30.28■■■□□ 2.44
CMTM4-202ENST00000394106 PCBP4P57723 403 aaKnown RBP30.28■■■□□ 2.44
CMTM4-202ENST00000394106 EIF3IQ13347 325 aaKnown RBP30.28■■■□□ 2.44
CMTM4-202ENST00000394106 KIR2DS5Q14953 304 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 IGF2-ASQ6U949 168 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 NAF1Q96HR8 494 aaKnown RBP30.28■■■□□ 2.44
CMTM4-202ENST00000394106 TLR10Q9BXR5 811 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 ASB8Q9H765 288 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 SMOXQ9NWM0 555 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 LOXL2Q9Y4K0 774 aa30.28■■■□□ 2.44
CMTM4-202ENST00000394106 OR5K4A6NMS3 321 aa30.27■■■□□ 2.44
CMTM4-202ENST00000394106 PDZK1P1A8MUH7 402 aa30.27■■■□□ 2.44
CMTM4-202ENST00000394106 MSH3P20585 1137 aa30.27■■■□□ 2.44
CMTM4-202ENST00000394106 ITPKBP27987 946 aa30.27■■■□□ 2.44
CMTM4-202ENST00000394106 SEPT6Q14141 434 aa30.27■■■□□ 2.44
CMTM4-202ENST00000394106 AHCYL2Q96HN2 611 aaKnown RBP30.27■■■□□ 2.44
CMTM4-202ENST00000394106 SCHIP1Q9P0W5 487 aaPredicted RBP30.27■■■□□ 2.44
CMTM4-202ENST00000394106 CPNE7Q9UBL6 633 aa30.27■■■□□ 2.44
CMTM4-202ENST00000394106 RALYQ9UKM9 306 aaKnown RBP30.27■■■□□ 2.44
CMTM4-202ENST00000394106 OR2AG2A6NM03 316 aa30.26■■■□□ 2.43
CMTM4-202ENST00000394106 CCL22O00626 93 aa30.26■■■□□ 2.43
CMTM4-202ENST00000394106 VCLP18206 1134 aa30.26■■■□□ 2.43
CMTM4-202ENST00000394106 ABCG1P45844 678 aa30.26■■■□□ 2.43
CMTM4-202ENST00000394106 CTSCP53634 463 aa30.26■■■□□ 2.43
CMTM4-202ENST00000394106 CLPPQ16740 277 aaPredicted RBP30.26■■■□□ 2.43
CMTM4-202ENST00000394106 ZNF574Q6ZN55 896 aaPredicted RBP30.26■■■□□ 2.43
CMTM4-202ENST00000394106 C11orf96Q7Z7L8 435 aa30.26■■■□□ 2.43
CMTM4-202ENST00000394106 PRUNE1Q86TP1 453 aa30.26■■■□□ 2.43
CMTM4-202ENST00000394106 ZNF248Q8NDW4 579 aa30.26■■■□□ 2.43
CMTM4-202ENST00000394106 SH3KBP1Q96B97 665 aa30.26■■■□□ 2.43
CMTM4-202ENST00000394106 PISDQ9UG56 409 aa30.26■■■□□ 2.43
CMTM4-202ENST00000394106 LDB2O43679 373 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 FGGP02679 453 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 JMJD7P0C870 316 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 HOXB3P14651 431 aaPredicted RBP30.25■■■□□ 2.43
CMTM4-202ENST00000394106 ETS1P14921 441 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 IDSP22304 550 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 RPL10P27635 214 aaKnown RBP30.25■■■□□ 2.43
CMTM4-202ENST00000394106 CSF2RBP32927 897 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 LMAN1P49257 510 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 GPLD1P80108 840 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 XIAPP98170 497 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 POU6F1Q14863 301 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 SIX1Q15475 284 aaPredicted RBP30.25■■■□□ 2.43
CMTM4-202ENST00000394106 TMEM220Q6QAJ8 160 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 DET1Q7L5Y6 550 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 CCDC89Q8N998 374 aa30.25■■■□□ 2.43
CMTM4-202ENST00000394106 OR10G6Q8NH81 332 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms