RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 LGMNQ99538 433 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 KXD1Q9BQD3 176 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ASB7Q9H672 318 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 LRTM1Q9HBL6 345 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 STOX2Q9P2F5 926 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 MRPS33Q9Y291 106 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 MEMO1Q9Y316 297 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 MYPNQ86TC9 1320 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 KANTRA0A1W2PQU2 76 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 DDTLA6NHG4 134 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 PDPK1O15530 556 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 SNX3O60493 162 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ZNF20P17024 532 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ZNF135P52742 658 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ZNF143P52747 638 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ADAM8P78325 824 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 CREMQ03060 361 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 NDUFA9Q16795 377 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 MINDY4Q4G0A6 757 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 PLEKHG4Q58EX7 1191 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 XKR4Q5GH76 650 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 CERCAMQ5T4B2 595 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 SLC8B1Q6J4K2 584 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 CFAP206Q8IYR0 622 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ZBTB2Q8N680 514 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 C1orf216Q8TAB5 229 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 PIGXQ8TBF5 258 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 HM13Q8TCT9 377 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 APOLD1Q96LR9 279 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 TCF7L1Q9HCS4 588 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 TMEM51Q9NW97 253 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ATXN10Q9UBB4 475 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 SORCS3Q9UPU3 1222 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 TMX2Q9Y320 296 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 LRRC72A6NJI9 287 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 KCNU1A8MYU2 1149 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ADM5C9JUS6 153 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 PDE2AO00408 941 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 CCNE2O96020 404 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 CYP1A2P05177 515 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ITGAVP06756 1048 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 LAMP2P13473 410 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 EFNA1P20827 205 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 TNFSF9P41273 254 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 RARRES1P49788 294 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 MRPS6P82932 125 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 PPP1R15BQ5SWA1 713 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 SLC9A4Q6AI14 798 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 LIX1Q8N485 282 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 TMEM199Q8N511 208 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ZNF557Q8N988 423 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 C12orf29Q8N999 325 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 OR4C6Q8NH72 309 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 SLC39A3Q9BRY0 314 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 RNF208Q9H0X6 261 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 NXF3Q9H4D5 531 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 S100A14Q9HCY8 104 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 CUEDC1Q9NWM3 386 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 NR2E1Q9Y466 385 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 TESMINQ9Y4I5 508 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 TIMM22Q9Y584 194 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 ALG5Q9Y673 324 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 COLEC10Q9Y6Z7 277 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 PNPLA6Q8IY17 1366 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 SPHKAPQ2M3C7 1700 aa5.64□□□□□ -1.51
GAPVD1-206ENST00000394104 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 A0A1W2PQH9 124 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 PRR5-ARHGAP8B1AHC4 643 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 ACKR2O00590 384 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 CXCL14O95715 111 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 ADH1CP00326 375 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 VIPP01282 170 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 ZNF16P17020 682 aaPredicted RBP5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 PPIBP23284 216 aaKnown RBP5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 PTX3P26022 381 aaPredicted RBP5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 CD40LGP29965 261 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 CCR3P51677 355 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 CAPZA1P52907 286 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 RGS8P57771 180 aaPredicted RBP5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 ARHGAP8P85298 464 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 RPL6Q02878 288 aaKnown RBP5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 PEX6Q13608 980 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 SCGB2B2Q4G0G5 96 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 GXYLT1Q4G148 440 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 ZNF611Q8N823 705 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 AKAP1Q92667 903 aaKnown RBP eCLIP5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 UFD1Q92890 307 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 ZFP3Q96NJ6 502 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 RNF157Q96PX1 679 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 MRPL45Q9BRJ2 306 aaKnown RBP5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 PDCD2LQ9BRP1 358 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 HTATIP2Q9BUP3 242 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 ARL8BQ9NVJ2 186 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 SIRPGQ9P1W8 387 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 SLC17A7Q9P2U7 560 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 CDH7Q9ULB5 785 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 FADS3Q9Y5Q0 445 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 LOC100509620A0A075B734 347 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 A0A0U1RQJ8 604 aa5.63□□□□□ -1.51
GAPVD1-206ENST00000394104 PLK4O00444 970 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms