RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 PCBP1Q15365 356 aaKnown RBP eCLIP22.56■■□□□ 1.2
RARA-202ENST00000394081 PGS1Q32NB8 556 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 ZNF691Q5VV52 312 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 LAIR2Q6ISS4 152 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 NOTUMQ6P988 496 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 KDELC1Q6UW63 502 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 TEX37Q96LM6 180 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 ZNF599Q96NL3 588 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 ATOH8Q96SQ7 321 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 MED10Q9BTT4 135 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 RGS18Q9NS28 235 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 UGT2A1Q9Y4X1 527 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 SNX10Q9Y5X0 201 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 ARNTLO00327 626 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 RGS13O14921 159 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 SIX3O95343 332 aaPredicted RBP22.56■■□□□ 1.2
RARA-202ENST00000394081 SLC25A27O95847 323 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 KCNE1P15382 129 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 ADPRMQ3LIE5 342 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 PAGE2BQ5JRK9 111 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 FAM219BQ5XKK7 198 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 TUBA3EQ6PEY2 450 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 SLC22A16Q86VW1 577 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 SLC7A5P1Q8MH63 180 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 OR52E4Q8NGH9 312 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 RHOXF1Q8NHV9 184 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 RORBQ92753 470 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 YIPF6Q96EC8 236 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 INTS7Q9NVH2 962 aaKnown RBP22.56■■□□□ 1.2
RARA-202ENST00000394081 RBM22Q9NW64 420 aaKnown RBP eCLIP22.56■■□□□ 1.2
RARA-202ENST00000394081 SMPD4Q9NXE4 827 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 BTRCQ9Y297 605 aa22.56■■□□□ 1.2
RARA-202ENST00000394081 COL4A4P53420 1690 aaPredicted RBP22.55■■□□□ 1.2
RARA-202ENST00000394081 SMIM28A0A1B0GU29 152 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 SLC16A6O15403 523 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 KPNA6O60684 536 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 CHEK2O96017 543 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 PRKG2Q13237 762 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 KCNAB2Q13303 367 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 PFKFB4Q16877 469 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 ZFAND4Q86XD8 727 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 OR52K2Q8NGK3 314 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 CHAC2Q8WUX2 184 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 POP5Q969H6 163 aaKnown RBP22.55■■□□□ 1.2
RARA-202ENST00000394081 KCNA7Q96RP8 456 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 SLC25A51Q9H1U9 297 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 SPC25Q9HBM1 224 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 V9GYQ6 96 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 LOC100130705A0A1B0GUX0 176 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 SAGE2PA6NJ88 616 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 MRPS14O60783 128 aaKnown RBP22.55■■□□□ 1.2
RARA-202ENST00000394081 CRCPO75575 148 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 BMP1P13497 986 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 UFM1P61960 85 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 PHC1P78364 1004 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 EMX1Q04741 257 aaPredicted RBP22.55■■□□□ 1.2
RARA-202ENST00000394081 XKR4Q5GH76 650 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 NANOGNBQ7Z5D8 188 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 AKAP14Q86UN6 197 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 ZNF300Q96RE9 604 aaPredicted RBP22.55■■□□□ 1.2
RARA-202ENST00000394081 TRIT1Q9H3H1 467 aaKnown RBP22.55■■□□□ 1.2
RARA-202ENST00000394081 CATSPERBQ9H7T0 1116 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 PAK1IP1Q9NWT1 392 aaPredicted RBP22.55■■□□□ 1.2
RARA-202ENST00000394081 OSER1Q9NX31 292 aa22.55■■□□□ 1.2
RARA-202ENST00000394081 MROH6A6NGR9 719 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 SNX2O60749 519 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 GSNP06396 782 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 NR4A1P22736 598 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 SLX4IPQ5VYV7 408 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 DSG4Q86SJ6 1040 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 RBM23Q86U06 439 aaKnown RBP22.54■■□□□ 1.2
RARA-202ENST00000394081 P2RY8Q86VZ1 359 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 MMAAQ8IVH4 418 aaKnown RBP22.54■■□□□ 1.2
RARA-202ENST00000394081 OR8J3Q8NGG0 315 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 C1QTNF3Q9BXJ4 246 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 POU2F3Q9UKI9 436 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 USP22Q9UPT9 525 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 DNAJC25-GNG10A0A024R161 153 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 PEX10O60683 326 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 UROSP10746 265 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 ZNF37AP17032 561 aaPredicted RBP22.54■■□□□ 1.2
RARA-202ENST00000394081 CES1P23141 567 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 PIGAP37287 484 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 LILRA4P59901 499 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 ARHGAP1Q07960 439 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 TIGD2Q4W5G0 525 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 SYT6Q5T7P8 510 aaPredicted RBP22.54■■□□□ 1.2
RARA-202ENST00000394081 ANKS6Q68DC2 871 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 DLEU7Q6UYE1 221 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 NSUN5Q96P11 429 aaKnown RBP22.54■■□□□ 1.2
RARA-202ENST00000394081 ASPSCR1Q9BZE9 553 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 SLAMF8Q9P0V8 285 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 INTS6Q9UL03 887 aaKnown RBP22.54■■□□□ 1.2
RARA-202ENST00000394081 MAGED1Q9Y5V3 778 aaPredicted RBP22.54■■□□□ 1.2
RARA-202ENST00000394081 PMF1-BGLAPU3KQ54 211 aa22.54■■□□□ 1.2
RARA-202ENST00000394081 TTC34A8MYJ7 566 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 TOR1BO14657 336 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 KERAO60938 352 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 EIF2DP41214 584 aaKnown RBP22.53■■□□□ 1.2
RARA-202ENST00000394081 OR4D1Q15615 310 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms