RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CPZQ66K79 652 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 CLEC17AQ6ZS10 378 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 ZNF547Q8IVP9 402 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 TRIM48Q8IWZ4 208 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 GALNT11Q8NCW6 608 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 GPR26Q8NDV2 337 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 CCHCR1Q8TD31 782 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 RUFY1Q96T51 708 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 TIMM29Q9BSF4 260 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 ZSCAN5AQ9BUG6 496 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 THAP2Q9H0W7 228 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 ACTL8Q9H568 366 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 LHX9Q9NQ69 397 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 GTF3C3Q9Y5Q9 886 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 PDZK1P1A8MUH7 402 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 ANKRD66B4E2M5 251 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 C21orf140B9A014 251 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 SORBS2O94875 1100 aaKnown RBP15.11■□□□□ 0.01
CHMP3-202ENST00000393773 ZNF7P17097 686 aaPredicted RBP15.11■□□□□ 0.01
CHMP3-202ENST00000393773 AMD1P17707 334 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 NELFEP18615 380 aaKnown RBP15.11■□□□□ 0.01
CHMP3-202ENST00000393773 CASP14P31944 242 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 CD86P42081 329 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 PPP1CAP62136 330 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 GBE1Q04446 702 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 GALNT3Q14435 633 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 KHDC1Q4VXA5 237 aaKnown RBP15.11■□□□□ 0.01
CHMP3-202ENST00000393773 TDRD12Q587J7 1177 aaKnown RBP15.11■□□□□ 0.01
CHMP3-202ENST00000393773 SASS6Q6UVJ0 657 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 FAM92BQ6ZTR7 304 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 LRRTM4Q86VH4 590 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 PPP1R3BQ86XI6 285 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 CPNE8Q86YQ8 564 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 TRAM1L1Q8N609 369 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 GLYATL1Q969I3 302 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 FAF2Q96CS3 445 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 HDAC11Q96DB2 347 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 TRIB3Q96RU7 358 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 ZNF670Q9BS34 389 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 MLPHQ9BV36 600 aaPredicted RBP15.11■□□□□ 0.01
CHMP3-202ENST00000393773 NUP85Q9BW27 656 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 SPATA16Q9BXB7 569 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 TRIM39Q9HCM9 518 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 SLC40A1Q9NP59 571 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 HAUS2Q9NVX0 235 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 SEMA5BQ9P283 1151 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 EPHA6Q9UF33 1036 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 IP6K2Q9UHH9 426 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 DNAJC16Q9Y2G8 782 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 PCSK5Q92824 1860 aa15.11■□□□□ 0.01
CHMP3-202ENST00000393773 FER1L5A0AVI2 2057 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 ABCA12Q86UK0 2595 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 PIPSLA2A3N6 862 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 OR52A4PA6NMU1 304 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 KMOO15229 486 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 VPS4BO75351 444 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 AGFG2O95081 481 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 SLC25A14O95258 325 aaPredicted RBP15.1■□□□□ 0.01
CHMP3-202ENST00000393773 MT-ND3P03897 115 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 ZBTB17Q13105 803 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 IL10RAQ13651 578 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 CCDC122Q5T0U0 273 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 AGAP9Q5VTM2 703 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 CACHD1Q5VU97 1274 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 HGSNATQ68CP4 663 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 PDPK2PQ6A1A2 396 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 ABRAXAS1Q6UWZ7 409 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 C11orf96Q7Z7L8 435 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 PQLC3Q8N755 202 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 CPT1CQ8TCG5 803 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 SLC41A2Q96JW4 573 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 RAB33BQ9H082 229 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 MLXIPLQ9NP71 852 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 PADI1Q9ULC6 663 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 VPS4AQ9UN37 437 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 SPTBP11277 2137 aa15.1■□□□□ 0.01
CHMP3-202ENST00000393773 CACNA1DQ01668 2161 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 MTX2O75431 263 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 SLC4A1P02730 911 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 CYP1A2P05177 515 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 CCNYL3P0C7X3 344 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 PIRTP0C851 137 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 RPL10P27635 214 aaKnown RBP15.09■□□□□ 0.01
CHMP3-202ENST00000393773 GJC1P36383 396 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 DRG2P55039 364 aaKnown RBP15.09■□□□□ 0.01
CHMP3-202ENST00000393773 RPS18P62269 152 aaKnown RBP15.09■□□□□ 0.01
CHMP3-202ENST00000393773 SLC10A2Q12908 348 aaPredicted RBP15.09■□□□□ 0.01
CHMP3-202ENST00000393773 TUBB3Q13509 450 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 UGT8Q16880 541 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 ATP13A4Q4VNC1 1196 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 FHL5Q5TD97 284 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 PWWP2BQ6NUJ5 590 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 IRGCQ6NXR0 463 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 CYB5D1Q6P9G0 228 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 WASH2PQ6VEQ5 465 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 RBM12BQ8IXT5 1001 aaKnown RBP15.09■□□□□ 0.01
CHMP3-202ENST00000393773 CNTD1Q8N815 330 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 GPR150Q8NGU9 434 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 SSC4DQ8WTU2 575 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 ZDHHC12Q96GR4 267 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms