RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 ASPGQ86U10 573 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 C11orf65Q8NCR3 313 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 OR7A2PQ8NGA2 310 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 CYGBQ8WWM9 190 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 LINC00052Q96N35 136 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 HERPUD2Q9BSE4 406 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 TRIM9Q9C026 710 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 FBXO5Q9UKT4 447 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 NID2Q14112 1375 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 MYMKA6NI61 221 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 A8MVJ9 347 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PIAS1O75925 651 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 BMP2P12643 396 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PPP3CCP48454 512 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PKNOX1P55347 436 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 CARD18P57730 90 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 RAPSNQ13702 412 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SEC23BQ15437 767 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 TPGS2Q68CL5 300 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PRMT9Q6P2P2 845 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 C16orf46Q6P387 395 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 DPP8Q6V1X1 898 aaPredicted RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 LINC00299Q6ZSB3 139 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ADGRG3Q86Y34 549 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SP8Q8IXZ3 490 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 DTD1Q8TEA8 209 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SLC7A6Q92536 515 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 FBXL20Q96IG2 436 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SPATA9Q9BWV2 254 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 EXD2Q9NVH0 621 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 CUEDC1Q9NWM3 386 aaPredicted RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 MLXQ9UH92 298 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 LIPT1Q9Y234 373 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PCDHGC4Q9Y5F7 938 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PCDHGB6Q9Y5F9 930 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PCDHGB2Q9Y5G2 931 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PCDHGA6Q9Y5G7 932 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PCDHGA5Q9Y5G8 931 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PCDHGA1Q9Y5H4 931 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 KLRG2A4D1S0 409 aaPredicted RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SDR42E2A6NKP2 422 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 TMEM127O75204 238 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ITGB1P05556 798 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 HK3P52790 923 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 RPL10AP62906 217 aaKnown RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 LIPEQ05469 1076 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 CA9Q16790 459 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 KIF19Q2TAC6 998 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 KLHL26Q53HC5 615 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SCYL2Q6P3W7 929 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ZCCHC12Q6PEW1 402 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ARFGAP1Q8N6T3 406 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 COPS5Q92905 334 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 FKBP10Q96AY3 582 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 QKIQ96PU8 341 aaKnown RBP eCLIP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 C1QTNF6Q9BXI9 259 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SHARPINQ9H0F6 387 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 LRRC19Q9H756 370 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 NOL11Q9H8H0 719 aaKnown RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 MN1Q10571 1320 aaPredicted RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 TIAM2Q8IVF5 1701 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ZNFX1Q9P2E3 1918 aaKnown RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 CCDC195A0A1B0GUA6 201 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SLCO1B7G3V0H7 640 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SOCS2O14508 198 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 TFECO14948 347 aaPredicted RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 CD36P16671 472 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ITGB6P18564 788 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 TNFAIP3P21580 790 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 GLDCP23378 1020 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 HTR1BP28222 390 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ETV5P41161 510 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 DEFA1P59665 94 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 DEFA3P59666 94 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SNAP25P60880 206 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 KCNAB2Q13303 367 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ORC1Q13415 861 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 KRR1Q13601 381 aaKnown RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ECM1Q16610 540 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 C3orf33Q6P1S2 294 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ADGRD1Q6QNK2 874 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 SVOPQ8N4V2 548 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 TBCKQ8TEA7 893 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 DEPDC1BQ8WUY9 529 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 RBPMSQ93062 196 aaKnown RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 RNF34Q969K3 372 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PIGSQ96S52 555 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 BCL7BQ9BQE9 202 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 ZYG11BQ9C0D3 744 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 LDAHQ9H6V9 325 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PRMT8Q9NR22 394 aaPredicted RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 CCM2LQ9NUG4 571 aaPredicted RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 TBC1D13Q9NVG8 400 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 IMPAD1Q9NX62 359 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 IFT80Q9P2H3 777 aaPredicted RBP11.31□□□□□ -0.6
LAMB1-203ENST00000393560 PGAP2Q9UHJ9 254 aa11.31□□□□□ -0.6
LAMB1-203ENST00000393560 TEX13CA0A0J9YWL9 993 aa11.3□□□□□ -0.6
LAMB1-203ENST00000393560 PSMD9O00233 223 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms