RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ZNF806P0C7X5 589 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 DANCRP0C864 163 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM106CPP0CH98 169 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 HSD3B1P14060 373 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF250P15622 560 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 DDX5P17844 614 aaKnown RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 IGFBP3P17936 291 aaPredicted RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ATF3P18847 181 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 VCAM1P19320 739 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 POLR2CP19387 275 aaPredicted RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 UGT1A1P22309 533 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 CCNE1P24864 410 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 HSD3B2P26439 372 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 KLRC2P26717 231 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 YWHAQP27348 245 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 RPA1P27694 616 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 PDHA2P29803 388 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 CORO1AP31146 461 aaKnown RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 PRKAR2BP31323 418 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 STX2P32856 288 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 PIK3CAP42336 1068 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 MATKP42679 507 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 TSFMP43897 325 aaKnown RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 GPR12P47775 334 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 NPBWR1P48145 328 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 LSSP48449 732 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 TRPC1P48995 793 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 AMPHP49418 695 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 KLK7P49862 253 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 MNAT1P51948 309 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 KPNA1P52294 538 aaPredicted RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 COPAP53621 1224 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 HDAC4P56524 1084 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC37A1P57057 533 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 DEFB103AP81534 67 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ZBED6P86452 979 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 CDK3Q00526 305 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 PLIN5Q00G26 463 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 CDR2Q01850 454 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF45Q02386 682 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 GUCY2DQ02846 1103 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 RNASELQ05823 741 aaKnown RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM27E3Q08E93 113 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 PAK2Q13177 524 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 SLAQ13239 276 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 GPR17Q13304 367 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 CBFBQ13951 182 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 STAT4Q14765 748 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 SF3A1Q15459 793 aaKnown RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ELF2Q15723 593 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 INSCQ1MX18 579 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 GSG1Q2KHT4 349 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 CCDC96Q2M329 555 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM266Q2M3C6 531 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 HNRNPA1L2Q32P51 320 aaKnown RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 GRAMD1BQ3KR37 738 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ZSCAN23Q3MJ62 389 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM35AQ53FP2 167 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 PLA1AQ53H76 456 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ASPRV1Q53RT3 343 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF326Q5BKZ1 582 aaKnown RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ARL13AQ5H913 290 aaPredicted RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 GPATCH4Q5T3I0 446 aaKnown RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 SYCP2LQ5T4T6 812 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 TSPO2Q5TGU0 170 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 VWA5B1Q5TIE3 1220 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 SYDE2Q5VT97 1194 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 LYSMD4Q5XG99 296 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 OR7E24Q6IFN5 339 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 RGMBQ6NW40 437 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 RPUSD3Q6P087 351 aaKnown RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 NFRKBQ6P4R8 1299 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 MZT2AQ6P582 158 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 SPINK6Q6UWN8 80 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 SCARA5Q6ZMJ2 495 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF600Q6ZNG1 722 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 UBE2R2Q712K3 238 aaPredicted RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 FCRLAQ7L513 359 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 MDGA2Q7Z553 956 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 NOXA1Q86UR1 476 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 C11orf74Q86VG3 221 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 LONP2Q86WA8 852 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 CARM1Q86X55 608 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 HOGA1Q86XE5 327 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 DGKHQ86XP1 1220 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM90A1Q86YD7 464 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 HIPK1Q86Z02 1210 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 TMC8Q8IU68 726 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 LACC1Q8IV20 430 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF695Q8IW36 515 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 FBXO16Q8IX29 292 aaPredicted RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF683Q8IZ20 524 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ADGRF3Q8IZF5 1079 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 C6orf223Q8N319 242 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 NGEFQ8N5V2 710 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 C14orf178Q8N769 122 aaPredicted RBP-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 ARIH2OSQ8N7S6 290 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 UBR7Q8N806 425 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 C4orf32Q8N8J7 132 aa-0.36□□□□□ -2.47
TRAJ28-201ENST00000390509 C11orf44Q8N8P7 122 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms