RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 MYLIPQ8WY64 445 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 DENND2DQ9H6A0 471 aaPredicted RBP24.92■■□□□ 1.58
SHOX2-201ENST00000389589 IL36AQ9UHA7 158 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 LEFTY1O75610 366 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 TM7SF2O76062 418 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 CDK14O94921 469 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 RPS17P08708 135 aaKnown RBP24.92■■□□□ 1.58
SHOX2-201ENST00000389589 PIK3R1P27986 724 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 VIPR1P32241 457 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 ST8SIA6P61647 398 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 SH3BP2P78314 561 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 LCP2Q13094 533 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 TCEAL5Q5H9L2 206 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 SUGP1Q8IWZ8 645 aaKnown RBP24.92■■□□□ 1.58
SHOX2-201ENST00000389589 MID1IP1Q9NPA3 183 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 NUDT4Q9NZJ9 180 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 PRSS21Q9Y6M0 314 aa24.92■■□□□ 1.58
SHOX2-201ENST00000389589 RGSL1A5PLK6 1076 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 TULP3O75386 442 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 SLC25A14O95258 325 aaPredicted RBP24.91■■□□□ 1.58
SHOX2-201ENST00000389589 TSPAN8P19075 237 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 DGKAP23743 735 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 CLCQ05315 142 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 ARSIQ5FYB1 569 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 RP9Q8TA86 221 aaKnown RBP24.91■■□□□ 1.58
SHOX2-201ENST00000389589 CCDC97Q96F63 343 aaPredicted RBP24.91■■□□□ 1.58
SHOX2-201ENST00000389589 CATSPER2Q96P56 530 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 LENG8Q96PV6 779 aaPredicted RBP24.91■■□□□ 1.58
SHOX2-201ENST00000389589 RTKNQ9BST9 563 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 OBP2AQ9NY56 170 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 CD274Q9NZQ7 290 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 DKK3Q9UBP4 350 aa24.91■■□□□ 1.58
SHOX2-201ENST00000389589 PBX2P40425 430 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 HERC3Q15034 1050 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 ZRSR2Q15696 482 aaKnown RBP24.9■■□□□ 1.58
SHOX2-201ENST00000389589 SCUBE1Q8IWY4 988 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 ETFBKMTQ8IXQ9 262 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 PELI3Q8N2H9 469 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 CLDN19Q8N6F1 224 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 VN1R2Q8NFZ6 395 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 FGF13Q92913 245 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 COPS8Q99627 209 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 LATS2Q9NRM7 1088 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 GDE1Q9NZC3 331 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 LOC100653049A0A140TA62 436 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 LRRC14BA6NHZ5 514 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 UPK3BL1B0FP48 263 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 UPK3BL2E5RIL1 263 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 AZIN1O14977 448 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 KRT34O76011 436 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 TRIM16O95361 564 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 MAGEA10P43363 369 aaPredicted RBP24.9■■□□□ 1.58
SHOX2-201ENST00000389589 CHSY3Q70JA7 882 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 MYO1HQ8N1T3 1032 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 ZBTB2Q8N680 514 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 AGAP11Q8TF27 550 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 RAD18Q9NS91 495 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 SPATS2LQ9NUQ6 558 aaKnown RBP24.9■■□□□ 1.58
SHOX2-201ENST00000389589 KLHL42Q9P2K6 505 aa24.9■■□□□ 1.58
SHOX2-201ENST00000389589 KIF26AQ9ULI4 1882 aaPredicted RBP24.89■■□□□ 1.58
SHOX2-201ENST00000389589 MEI4A8MW99 385 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 TGFBIQ15582 683 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 UGT3A2Q3SY77 523 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 ATP13A5Q4VNC0 1218 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 ZNF805Q5CZA5 627 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 GPRC6AQ5T6X5 926 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 TMEM198Q66K66 360 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 CLEC6AQ6EIG7 209 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 FRA10AC1Q70Z53 315 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 C12orf40Q86WS4 652 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 TRPC4APQ8TEL6 797 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 ZNF483Q8TF39 744 aaPredicted RBP24.89■■□□□ 1.58
SHOX2-201ENST00000389589 PANX3Q96QZ0 392 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 THTPAQ9BU02 230 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 TRPV4Q9HBA0 871 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 ELOVL2Q9NXB9 296 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 PLXNA2O75051 1894 aa24.89■■□□□ 1.58
SHOX2-201ENST00000389589 MLYCDO95822 493 aa24.89■■□□□ 1.57
SHOX2-201ENST00000389589 LMNAP02545 664 aaKnown RBP24.89■■□□□ 1.57
SHOX2-201ENST00000389589 HK3P52790 923 aa24.89■■□□□ 1.57
SHOX2-201ENST00000389589 TTLL9Q3SXZ7 439 aa24.89■■□□□ 1.57
SHOX2-201ENST00000389589 RARS2Q5T160 578 aaKnown RBP24.89■■□□□ 1.57
SHOX2-201ENST00000389589 KANK2Q63ZY3 851 aa24.89■■□□□ 1.57
SHOX2-201ENST00000389589 LKAAEAR1Q8TD35 194 aa24.89■■□□□ 1.57
SHOX2-201ENST00000389589 DTX3LQ8TDB6 740 aa24.89■■□□□ 1.57
SHOX2-201ENST00000389589 NSUN5Q96P11 429 aaKnown RBP24.89■■□□□ 1.57
SHOX2-201ENST00000389589 ZBTB26Q9HCK0 441 aa24.89■■□□□ 1.57
SHOX2-201ENST00000389589 THG1LQ9NWX6 298 aaKnown RBP24.89■■□□□ 1.57
SHOX2-201ENST00000389589 G3BP2Q9UN86 482 aaKnown RBP24.89■■□□□ 1.57
SHOX2-201ENST00000389589 COPG1Q9Y678 874 aaKnown RBP24.89■■□□□ 1.57
SHOX2-201ENST00000389589 IGLV3-16A0A075B6K0 115 aa24.88■■□□□ 1.57
SHOX2-201ENST00000389589 NCF1BA6NI72 391 aaPredicted RBP24.88■■□□□ 1.57
SHOX2-201ENST00000389589 NCF1CA8MVU1 366 aaPredicted RBP24.88■■□□□ 1.57
SHOX2-201ENST00000389589 NCF1P14598 390 aaPredicted RBP24.88■■□□□ 1.57
SHOX2-201ENST00000389589 ARSAP15289 507 aa24.88■■□□□ 1.57
SHOX2-201ENST00000389589 TIMP2P16035 220 aa24.88■■□□□ 1.57
SHOX2-201ENST00000389589 ITGB6P18564 788 aa24.88■■□□□ 1.57
SHOX2-201ENST00000389589 DCDC1P59894 354 aa24.88■■□□□ 1.57
SHOX2-201ENST00000389589 LRRC73Q5JTD7 316 aa24.88■■□□□ 1.57
SHOX2-201ENST00000389589 GDPD5Q8WTR4 605 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms