RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TMEM9Q9P0T7 183 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 GALPQ9UBC7 116 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 RAPGEFL1Q9UHV5 662 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 TMCC2O75069 709 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 UGT2B11O75310 529 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 NDUFA5Q16718 116 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ZNF57Q68EA5 555 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ADCK2Q7Z695 626 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ADAMTSL2Q86TH1 951 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ABHD16BQ9H3Z7 469 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 TOR3AQ9H497 397 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 KAT8Q9H7Z6 458 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 IPPKQ9H8X2 491 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 DNAJB9Q9UBS3 223 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ZNF221Q9UK13 617 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 AP3M1Q9Y2T2 418 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 FUOMA2VDF0 154 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 CXCR6O00574 342 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC7A4O43246 635 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 PRKD3O94806 890 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 EGFRP00533 1210 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 COL6A1P12109 1028 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 DARSP14868 501 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 HSPA7P48741 367 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 NPTX1Q15818 432 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 TMEM53Q6P2H8 277 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ARMCX6Q7L4S7 300 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 C11orf96Q7Z7L8 435 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 HID1Q8IV36 788 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 KDM1BQ8NB78 822 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 OLIG1Q8TAK6 271 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ARNTL2Q8WYA1 636 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 HERC2P3Q9BVR0 1158 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 YTHDF1Q9BYJ9 559 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 STMN3Q9NZ72 180 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 H2AFY2Q9P0M6 372 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 PCDHGA7Q9Y5G6 932 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 C7orf72A4D263 438 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAM25AB3EWG3 89 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAM25CB3EWG5 89 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAM25GB3EWG6 89 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 SERPINI2O75830 405 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 PGK1P00558 417 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 PRKCGP05129 697 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 JUNP05412 331 aaKnown RBP13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 LPOP22079 712 aaPredicted RBP13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 RELAQ04206 551 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 GRB7Q14451 532 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 LAPTM4AQ15012 233 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 CYP2A13Q16696 494 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 MAVSQ7Z434 540 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC15A4Q8N697 577 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 METTL25Q8N6Q8 603 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 OR13C4Q8NGS5 318 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 PSMG2Q969U7 264 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 KIFC1Q9BW19 673 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 NRCAMQ92823 1304 aa13.02□□□□□ -0.32
TRAPPC9-201ENST00000389328 CDH1P12830 882 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CD36P16671 472 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 GNPDA1P46926 289 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 ARSFP54793 590 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 EEFSECP57772 596 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 KRT33BQ14525 404 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 TARBP2Q15633 366 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CASP12Q6UXS9 341 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 TLK2Q86UE8 772 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CIR1Q86X95 450 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 RASAL3Q86YV0 1011 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CPNE9Q8IYJ1 553 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 SMG8Q8ND04 991 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 HMCESQ96FZ2 354 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 VPS35Q96QK1 796 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 HDHD2Q9H0R4 259 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 ZNF490Q9ULM2 529 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 KLHL20Q9Y2M5 609 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 SH3BP1Q9Y3L3 701 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 KCTD3Q9Y597 815 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 ARL5AQ9Y689 179 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 A0A1W2PP18 115 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 EFCAB9A8MZ26 197 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 ABCB7O75027 752 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 SERPINA1P01009 418 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 OR4Q2P0C623 313 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CTPS1P17812 591 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CYP3A5P20815 502 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 VBP1P61758 197 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 ALDH6A1Q02252 535 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 TAB1Q15750 504 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 PHKG1Q16816 387 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 LUZP2Q86TE4 346 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CMTR2Q8IYT2 770 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CRYBG2Q8N1P7 616 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CAMKK1Q8N5S9 505 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 SCAMP5Q8TAC9 235 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 GRIN3AQ8TCU5 1115 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CENPIQ92674 756 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 B3GALT6Q96L58 329 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 TM6SF2Q9BZW4 377 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms