RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PACS1Q6VY07 963 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 RAPH1Q70E73 1250 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 SLC16A9Q7RTY1 509 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ADGRG6Q86SQ4 1221 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 TBC1D1Q86TI0 1168 aaPredicted RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ISCA2Q86U28 154 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 SUGP1Q8IWZ8 645 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ZBED8Q8IZ13 594 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 PARP8Q8N3A8 854 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF843Q8N446 348 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 DNAJC22Q8N4W6 341 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 RAB42Q8N4Z0 105 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 TMEM57Q8N5G2 664 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 PAF1Q8N7H5 531 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 PLD5Q8N7P1 536 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 POM121L12Q8N7R1 296 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF383Q8NA42 475 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 KBTBD8Q8NFY9 601 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 THAP6Q8TBB0 222 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 UTP15Q8TED0 518 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 AFG1LQ8WV93 481 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ZFAND2BQ8WV99 257 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 RUFY2Q8WXA3 655 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 DNAAF4Q8WXU2 420 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 GTF3AQ92664 365 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 SEMA4DQ92854 862 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 APBB2Q92870 758 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 SLC41A2Q96JW4 573 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 CNOT6LQ96LI5 555 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ZIM3Q96PE6 472 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 EYA3Q99504 573 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 FAM110AQ9BQ89 295 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 DGCR6LQ9BY27 220 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 IFIH1Q9BYX4 1025 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 USP44Q9H0E7 712 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 TKTL2Q9H0I9 626 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 PANK3Q9H999 370 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 NOD2Q9HC29 1040 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 SAYSD1Q9NPB0 183 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 INTS9Q9NV88 658 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 BEX4Q9NWD9 120 aaPredicted RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 KIAA1456Q9P272 454 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 KLHL9Q9P2J3 617 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 SRP68Q9UHB9 627 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 TUBE1Q9UJT0 475 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 DNAJC16Q9Y2G8 782 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 LRCH1Q9Y2L9 728 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 RRP7AQ9Y3A4 280 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 CEPT1Q9Y6K0 416 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 IGHV3OR16-10A0A075B7F0 116 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 IGLV9-49A0A0B4J1Y8 123 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 MEX3AA1L020 520 aaKnown RBP0.45□□□□□ -2.34
SNORD28-201ENST00000384706 C15orf62A8K5M9 175 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 SRRM5B3KS81 715 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 FAM90A26D6RGX4 464 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 IFNL4K9M1U5 179 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 M0QZ24 198 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 IPO5O00410 1097 aaKnown RBP0.45□□□□□ -2.34
SNORD28-201ENST00000384706 PLK4O00444 970 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 SOCS3O14543 225 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 KLK10O43240 276 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 BUD23O43709 281 aaKnown RBP0.45□□□□□ -2.34
SNORD28-201ENST00000384706 IDH3BO43837 385 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 GPR137BO60478 399 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 TACC1O75410 805 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 WISP2O76076 250 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 NXPH2O95156 264 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 CSPG5O95196 566 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 C22orf31O95567 290 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 CSTBP04080 98 aaKnown RBP0.45□□□□□ -2.34
SNORD28-201ENST00000384706 URODP06132 367 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 MELTFP08582 738 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 IRF1P10914 325 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 GP9P14770 177 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 UBA7P41226 1012 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 APOBEC1P41238 236 aaKnown RBP0.45□□□□□ -2.34
SNORD28-201ENST00000384706 HALP42357 657 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 MTHFRP42898 656 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 FASLGP48023 281 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 HNRNPA3P51991 378 aaKnown RBP0.45□□□□□ -2.34
SNORD28-201ENST00000384706 CD81P60033 236 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 ACTR2P61160 394 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 EFNB1P98172 346 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 NDPQ00604 133 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 POU5F1Q01860 360 aaKnown RBP0.45□□□□□ -2.34
SNORD28-201ENST00000384706 ICA1Q05084 483 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 PAX8Q06710 450 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 ZFP36L1Q07352 338 aaKnown RBP0.45□□□□□ -2.34
SNORD28-201ENST00000384706 LRMPQ12912 555 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 CDC16Q13042 620 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 NFATC2Q13469 925 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 RNPS1Q15287 305 aaKnown RBP0.45□□□□□ -2.34
SNORD28-201ENST00000384706 TEAD2Q15562 447 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 HLA-BQ31612 363 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 HIGD2BQ4VC39 106 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 CCDC38Q502W7 563 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 XKR3Q5GH77 459 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 WLSQ5T9L3 541 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 FHL5Q5TD97 284 aa0.45□□□□□ -2.34
SNORD28-201ENST00000384706 TANGO2Q6ICL3 276 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms