RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 NCF1BA6NI72 391 aaPredicted RBP19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 NCF1CA8MVU1 366 aaPredicted RBP19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 PPP6CO00743 305 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 SDHDO14521 159 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 KLK8O60259 260 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 SKAP2O75563 359 aaPredicted RBP19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 TRIM16O95361 564 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 NCF1P14598 390 aaPredicted RBP19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 TIMP2P16035 220 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 EEF1DP29692 281 aaKnown RBP19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 HK3P52790 923 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 ST8SIA6P61647 398 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 SH3BP2P78314 561 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 BTKQ06187 659 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 FBXO48Q5FWF7 155 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 MACC1Q6ZN28 852 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 AFAP1L2Q8N4X5 818 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 FAM13CQ8NE31 585 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 NSUN5Q96P11 429 aaKnown RBP19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 ABCG8Q9H221 673 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 G3BP2Q9UN86 482 aaKnown RBP19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 LRRK1Q38SD2 2015 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 PLXNA2O75051 1894 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 CYP2A6P11509 494 aaPredicted RBP19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 ZNF30P17039 623 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 FCARP24071 287 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 KLF10Q13118 480 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 ZNF805Q5CZA5 627 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 ZDHHC20Q5W0Z9 365 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 CLEC6AQ6EIG7 209 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 TANGO2Q6ICL3 276 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 GPSM1Q86YR5 675 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 LRIG1Q96JA1 1093 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 ASB2Q96Q27 587 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 TRPV4Q9HBA0 871 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 PCDH12Q9NPG4 1184 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 ZDHHC3Q9NYG2 299 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 DEC1Q9P2X7 70 aa19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 TSR3Q9UJK0 312 aaKnown RBP19.63■□□□□ 0.73
PDLIM5-205ENST00000380180 TSPAN11A1L157 253 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 UPK3BL1B0FP48 263 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 UPK3BL2E5RIL1 263 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 LINC01565O15544 149 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 CDK14O94921 469 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 VIPR1P32241 457 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 SNCBQ16143 134 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 POM121L1PQ3SYA9 428 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 FAM219BQ5XKK7 198 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 TMEM198Q66K66 360 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 MCUR1Q96AQ8 359 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 HPS4Q9NQG7 708 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 OBP2AQ9NY56 170 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 PKD2L2Q9NZM6 624 aa19.62■□□□□ 0.73
PDLIM5-205ENST00000380180 LOC100653049A0A140TA62 436 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 KRT34O76011 436 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 NSG1P42857 185 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 NAA25Q14CX7 972 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 TGFBIQ15582 683 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 RAB30Q15771 203 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 HSD11B1LQ7Z5J1 315 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 CEP70Q8NHQ1 597 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 TRPC4APQ8TEL6 797 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 MRPL38Q96DV4 380 aaKnown RBP19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 CMTM5Q96DZ9 223 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 COPS8Q99627 209 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 C1orf21Q9H246 121 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 MEAF6Q9HAF1 191 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 MID1IP1Q9NPA3 183 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 THG1LQ9NWX6 298 aaKnown RBP19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 MUC22E2RYF6 1773 aaPredicted RBP19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 C16orf96A6NNT2 1141 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 STX16-NPEPL1H3BU86 382 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 STX16O14662 325 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 AGTR2P50052 363 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 MXRA7P84157 204 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 B4GALNT1Q00973 533 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 CLCQ05315 142 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 GPRC6AQ5T6X5 926 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 ANKS6Q68DC2 871 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 SYCE2Q6PIF2 218 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 KIRREL3Q8IZU9 778 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 CATSPER2Q96P56 530 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 ZFP14Q9HCL3 533 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 UTP6Q9NYH9 597 aaKnown RBP19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 CD274Q9NZQ7 290 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 DKK3Q9UBP4 350 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 TMPRSS11EQ9UL52 423 aa19.61■□□□□ 0.73
PDLIM5-205ENST00000380180 FGF4P08620 206 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 MNAT1P51948 309 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 SATB1Q01826 763 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 UGT3A2Q3SY77 523 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 TXNDC11Q6PKC3 985 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 VITQ6UXI7 678 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 TMEM184AQ6ZMB5 413 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 CLYBLQ8N0X4 340 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 CPSF7Q8N684 471 aaKnown RBP19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 HCAR2Q8TDS4 363 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 SCAMP4Q969E2 229 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 PPP2R3CQ969Q6 453 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 LENG8Q96PV6 779 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms