RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CCNIQ14094 377 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 TSNQ15631 228 aaKnown RBP10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 GEN1Q17RS7 908 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 PIGGQ5H8A4 983 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 PITRM1Q5JRX3 1037 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 ZDHHC20Q5W0Z9 365 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 CLEC6AQ6EIG7 209 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 ZFP1Q6P2D0 407 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 GPSM1Q86YR5 675 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 HPS6Q86YV9 775 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 PCDH20Q8N6Y1 951 aaKnown RBP10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 SIDT2Q8NBJ9 832 aaKnown RBP10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 OR56A4Q8NGH8 313 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 SP7Q8TDD2 431 aaPredicted RBP10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 NRG4Q8WWG1 115 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 DLG3Q92796 817 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 SMIM14Q96QK8 99 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 CORO1BQ9BR76 489 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 SLC46A2Q9BY10 475 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 CPEB1Q9BZB8 566 aaKnown RBP10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 TNFRSF12AQ9NP84 129 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 SARDHQ9UL12 918 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 HS3ST2Q9Y278 367 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 LRCH1Q9Y2L9 728 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 PPIL1Q9Y3C6 166 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 RWDD3Q9Y3V2 267 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 MTF2Q9Y483 593 aaPredicted RBP10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 TNPO3Q9Y5L0 923 aaKnown RBP10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 GLYATL1P3A0A0U1RQE8 302 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 K7ERQ8 282 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 CDC7O00311 574 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 TRIM38O00635 465 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 SCAMP3O14828 347 aaKnown RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 SMAD6O43541 496 aaKnown RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 OR1I1O60431 355 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 CRCPO75575 148 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 SIX3O95343 332 aaPredicted RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 PRAMEF1O95521 474 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 S100BP04271 92 aaPredicted RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 ALPIP09923 528 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 UROSP10746 265 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 SRCP12931 536 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 ENO3P13929 434 aaPredicted RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 TCF3P15923 654 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 PTPN2P17706 415 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 LBPP18428 481 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 HOXA9P31269 272 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 CD70P32970 193 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 CDH13P55290 713 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 PKNOX1P55347 436 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 GRIK2Q13002 908 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 CDKN3Q16667 212 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 GSTA3Q16772 222 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 ZNF423Q2M1K9 1284 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 MMEL1Q495T6 779 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 PTRHD1Q6GMV3 140 aaKnown RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 OGFOD2Q6N063 350 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 C22orf39Q6P5X5 142 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 GK5Q6ZS86 529 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 TPGS1Q6ZTW0 290 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 RPS27LQ71UM5 84 aaKnown RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 SPATA19Q7Z5L4 167 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 DHDDSQ86SQ9 333 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 SERPINA9Q86WD7 417 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 TMEM126BQ8IUX1 230 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 SLC26A7Q8TE54 656 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 TRPC4APQ8TEL6 797 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 N4BP2L2Q92802 583 aaPredicted RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 ROPN1LQ96C74 230 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 MARK4Q96L34 752 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 ZNF641Q96N77 438 aaPredicted RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 CDRT15Q96T59 188 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 ZNF184Q99676 751 aaPredicted RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 ASB8Q9H765 288 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 UBE2ZQ9H832 354 aaPredicted RBP10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 TMEM45AQ9NWC5 275 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 KLHL42Q9P2K6 505 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 TBC1D14Q9P2M4 693 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 PCTPQ9UKL6 214 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 DNAJC15Q9Y5T4 150 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 WASF2Q9Y6W5 498 aa10.36□□□□□ -0.75
POLR2J3-201ENST00000379340 PIP5K1BO14986 540 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CCL16O15467 120 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 ZNF821O75541 412 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 MATN4O95460 622 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 ESRRBO95718 433 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 DGKAP23743 735 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 ACRV1P26436 265 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 HNF1BP35680 557 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 UBE3AQ05086 875 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 NFATC2Q13469 925 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PCBP2Q15366 365 aaKnown RBP eCLIP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 MYLK3Q32MK0 819 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 AGKQ53H12 422 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 COQ5Q5HYK3 327 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 TCHHL1Q5QJ38 904 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 REP15Q6BDI9 236 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 METTL2BQ6P1Q9 378 aaKnown RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CYHR1Q6ZMK1 362 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 MACC1Q6ZN28 852 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms