RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 MPSTP25325 297 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 CDC25BP30305 580 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 ETV5P41161 510 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 CLCNKAP51800 687 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 VAC14Q08AM6 782 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 ITGA9Q13797 1035 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 ATP13A5Q4VNC0 1218 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 TMEM71Q6P5X7 295 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 FAM151BQ6UXP7 276 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 ZNF574Q6ZN55 896 aaPredicted RBP24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 TRAPPC5Q8IUR0 188 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 TTC30BQ8N4P2 665 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 FAM118BQ9BPY3 351 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 TIMM29Q9BSF4 260 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 PRDM8Q9NQV8 689 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 PCDHB11Q9Y5F2 797 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 ADGRG1Q9Y653 693 aa24.33■■□□□ 1.49
TNFRSF4-201ENST00000379236 GLYATL1P3A0A0U1RQE8 302 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 MIF4GDA9UHW6 222 aaKnown RBP24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 STX7O15400 261 aaKnown RBP24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 PPFIA2O75334 1257 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 LIPCP11150 499 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 PYGMP11217 842 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 CSF2RBP32927 897 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 SQSTM1Q13501 440 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 SEPT7Q16181 437 aaKnown RBP24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 ANKRD20A2Q5SQ80 823 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 ANKRD20A1Q5TYW2 823 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 ANKRD20A3Q5VUR7 823 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 LRRC57Q8N9N7 239 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 AGBL5Q8NDL9 886 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 BBC3Q96PG8 261 aaPredicted RBP24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 DESI2Q9BSY9 194 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 IL17CQ9P0M4 197 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 CPNE7Q9UBL6 633 aa24.32■■□□□ 1.48
TNFRSF4-201ENST00000379236 C2orf81A6NN90 581 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 BUD23O43709 281 aaKnown RBP24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 AGTP01019 485 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 VIPP01282 170 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 THRAP10827 490 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 PSMB4P28070 264 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 EPHA4P54764 986 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 TMEM115Q12893 351 aaPredicted RBP24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 SNAP47Q5SQN1 464 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 LDLRAP1Q5SW96 308 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 AADACL2Q6P093 401 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 TTC13Q8NBP0 860 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 NCSTNQ92542 709 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 ALG3Q92685 438 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 CCNL2Q96S94 520 aaPredicted RBP24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 IL26Q9NPH9 171 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 ACSL6Q9UKU0 697 aa24.31■■□□□ 1.48
TNFRSF4-201ENST00000379236 A6NCN8 305 aa24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 ATXN7O15265 892 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 IDSP22304 550 aa24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 CD82P27701 267 aa24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 RHDQ02161 417 aa24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 CHRNA6Q15825 494 aa24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 TAF1BQ53T94 588 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 FAM129CQ86XR2 697 aa24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 DTX3LQ8TDB6 740 aa24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 SPATA13Q96N96 652 aa24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 EPB41L1Q9H4G0 881 aa24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 TMEM9Q9P0T7 183 aa24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 PACSIN2Q9UNF0 486 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF4-201ENST00000379236 A8MU76 341 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 CCL4P13236 92 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 AKT1P31749 480 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 TMEM139Q8IV31 216 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 CCDC110Q8TBZ0 833 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 SLC39A7Q92504 469 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 TAAR9Q96RI9 348 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 APOL2Q9BQE5 337 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 B3GNT4Q9C0J1 378 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 FOXJ2Q9P0K8 574 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 TRIM10Q9UDY6 481 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 SLC23A2Q9UGH3 650 aa24.29■■□□□ 1.48
TNFRSF4-201ENST00000379236 C9orf172C9J069 976 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 ERVH48-1M5A8F1 160 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 FTCDO95954 541 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 LPOP22079 712 aaPredicted RBP24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 HALP42357 657 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 PDE1BQ01064 536 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 TAF1AQ15573 450 aaPredicted RBP24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 KHDC1Q4VXA5 237 aaKnown RBP24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 MANEAQ5SRI9 462 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 WDR74Q6RFH5 385 aaPredicted RBP24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 ARHGEF18Q6ZSZ5 1173 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 ZFAND4Q86XD8 727 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 CXorf40BQ96DE9 158 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 TMPRSS11EQ9UL52 423 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 ARL5AQ9Y689 179 aa24.28■■□□□ 1.48
TNFRSF4-201ENST00000379236 C5orf60A6NFR6 353 aa24.27■■□□□ 1.48
TNFRSF4-201ENST00000379236 LILRA5A6NI73 299 aa24.27■■□□□ 1.48
TNFRSF4-201ENST00000379236 EFCAB7A8K855 629 aa24.27■■□□□ 1.48
TNFRSF4-201ENST00000379236 K7ENP7 123 aa24.27■■□□□ 1.48
TNFRSF4-201ENST00000379236 TK2O00142 265 aa24.27■■□□□ 1.48
TNFRSF4-201ENST00000379236 UGT1A9O60656 530 aa24.27■■□□□ 1.48
TNFRSF4-201ENST00000379236 PRAMEF1O95521 474 aa24.27■■□□□ 1.48
TNFRSF4-201ENST00000379236 CRTAMO95727 393 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms