RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 GNPDA1P46926 289 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 POLD2P49005 469 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 TUBB4BP68371 445 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 SLC7A5Q01650 507 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 GUCY2DQ02846 1103 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 ITIH4Q14624 930 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 BBS9Q3SYG4 887 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 ANKRD20A4Q4UJ75 823 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 PYCR3Q53H96 274 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 MRNIPQ6NTE8 343 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 LVRNQ6Q4G3 990 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 MARK2Q7KZI7 788 aaKnown RBP11.78□□□□□ -0.52
PCNA-201ENST00000379143 TAS2R42Q7RTR8 314 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 KANSL1Q7Z3B3 1105 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 LRRTM4Q86VH4 590 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 NAXDQ8IW45 347 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 RBFAQ8N0V3 343 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 LMX1AQ8TE12 382 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 SETD7Q8WTS6 366 aaKnown RBP11.78□□□□□ -0.52
PCNA-201ENST00000379143 ZNF669Q96BR6 464 aaPredicted RBP11.78□□□□□ -0.52
PCNA-201ENST00000379143 GSDMCQ9BYG8 508 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 CATSPERZQ9NTU4 200 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 ZDHHC3Q9NYG2 299 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 NLGN3Q9NZ94 848 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 ZNHIT2Q9UHR6 403 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 GPR34Q9UPC5 381 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 DOLKQ9UPQ8 538 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 GPSM3Q9Y4H4 160 aa11.78□□□□□ -0.52
PCNA-201ENST00000379143 IGLV3-16A0A075B6K0 115 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 E7ESA3 106 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 F8W8V4 182 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 QSOX1O00391 747 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 CD3EAPO15446 510 aaKnown RBP11.77□□□□□ -0.53
PCNA-201ENST00000379143 KCNJ13O60928 360 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 MTX2O75431 263 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 FUCA1P04066 466 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 ANXA6P08133 673 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 NSG1P42857 185 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 TTPAP49638 278 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 PLTPP55058 493 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 SPANXN3Q5MJ09 141 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 PSAPL1Q6NUJ1 521 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 CEP128Q6ZU80 1094 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 SDCCAG8Q86SQ7 713 aaPredicted RBP11.77□□□□□ -0.53
PCNA-201ENST00000379143 SERPINA9Q86WD7 417 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 GATAD2AQ86YP4 633 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 LMNTD2Q8IXW0 634 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 PIANPQ8IYJ0 282 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 AGGF1Q8N302 714 aaeCLIP11.77□□□□□ -0.53
PCNA-201ENST00000379143 SLC25A45Q8N413 288 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
PCNA-201ENST00000379143 OR4C6Q8NH72 309 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 FBXO25Q8TCJ0 367 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 GPBAR1Q8TDU6 330 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 DCBLD2Q96PD2 775 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 RTKNQ9BST9 563 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 TSPYL1Q9H0U9 437 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 TMEM168Q9H0V1 697 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 TCEAL2Q9H3H9 227 aaPredicted RBP11.77□□□□□ -0.53
PCNA-201ENST00000379143 SLC32A1Q9H598 525 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 FAM96AQ9H5X1 160 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 EPB41L5Q9HCM4 733 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 ARFGAP3Q9NP61 516 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 UCKL1Q9NWZ5 548 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 NCKIPSDQ9NZQ3 722 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 TEX264Q9Y6I9 313 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 DNMT3AQ9Y6K1 912 aaPredicted RBP11.77□□□□□ -0.53
PCNA-201ENST00000379143 FAM169AQ9Y6X4 670 aa11.77□□□□□ -0.53
PCNA-201ENST00000379143 PLXNB3Q9ULL4 1909 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 ZCWPW2A0A1B0GU75 182 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 OR51F1A6NGY5 319 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 AP2A2O94973 939 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 ATP1B2P14415 290 aaPredicted RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 ZNF7P17097 686 aaPredicted RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 VCLP18206 1134 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 CSRP1P21291 193 aaKnown RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 PMLP29590 882 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 ELK3P41970 407 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 ARCN1P48444 511 aaKnown RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 CDKN1CP49918 316 aaPredicted RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 PDIA2Q13087 525 aaKnown RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 C1orf61Q13536 156 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 THOC5Q13769 683 aaKnown RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 LONRF1Q17RB8 773 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 MSS51Q4VC12 460 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 KHDC1Q4VXA5 237 aaKnown RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 ZNF648Q5T619 568 aaPredicted RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 RNF187Q5TA31 235 aaPredicted RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 KCTD16Q68DU8 428 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 ZCCHC8Q6NZY4 707 aaKnown RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 CES3Q6UWW8 571 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 PACS1Q6VY07 963 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 CHST15Q7LFX5 561 aaPredicted RBP11.76□□□□□ -0.53
PCNA-201ENST00000379143 TAF8Q7Z7C8 310 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 TRAPPC5Q8IUR0 188 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 RASGEF1AQ8N9B8 481 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 GPR150Q8NGU9 434 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 CALML6Q8TD86 181 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 RHBDD1Q8TEB9 315 aa11.76□□□□□ -0.53
PCNA-201ENST00000379143 GLMNQ92990 594 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms