RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NALCNQ8IZF0 1738 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 H3BM21 787 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 HTR3BO95264 441 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 CHRNA1P02708 482 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 GLAP06280 429 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 CYP2A6P11509 494 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 WARSP23381 471 aaKnown RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 DNAJB1P25685 340 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 RAB5BP61020 215 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 HSF2Q03933 536 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 ITKQ08881 620 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 FAM98BQ52LJ0 330 aaKnown RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 R3HCC1LQ7Z5L2 792 aaKnown RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 TMIEQ8NEW7 156 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 CRELD1Q96HD1 420 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 TTPALQ9BTX7 342 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 CCDC167Q9P0B6 97 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 TMEM216Q9P0N5 145 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 EIF3KQ9UBQ5 218 aaKnown RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 KCNH4Q9UQ05 1017 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 CAMTA1Q9Y6Y1 1673 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 C9IYK1 514 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 TGFB1I1O43294 461 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 BANF1O75531 89 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 MAGEA2P43356 314 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 SLC7A2P52569 658 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF169Q14929 603 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 TRIP4Q15650 581 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 C4orf46Q504U0 113 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 LCN1P1Q5VSP4 162 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 LRRC8DQ7L1W4 858 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 BEND7Q8N7W2 519 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 GANCQ8TET4 914 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 CANT1Q8WVQ1 401 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 SLCO2A1Q92959 643 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 GPRASP2Q96D09 838 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 TOPORSQ9NS56 1045 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 SEC14L4Q9UDX3 406 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 TMPRSS11EQ9UL52 423 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 STAP1Q9ULZ2 295 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF451Q9Y4E5 1061 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 MED1Q15648 1581 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 UBDO15205 165 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 RGS10O43665 173 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 TRIM13O60858 407 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 MAFO75444 373 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 SPATA31C1P0DKV0 1188 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 ICAM2P13598 275 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 G0S2P27469 103 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 TEKQ02763 1124 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 MXD4Q14582 209 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 RETSATQ6NUM9 610 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 CYP4Z2PQ8N1L4 340 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 ACTL9Q8TC94 416 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 ZFAND1Q8TCF1 268 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 RBPMSQ93062 196 aaKnown RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 TAAR1Q96RJ0 339 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 FAM129BQ96TA1 746 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 SLC30A2Q9BRI3 323 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF395Q9H8N7 513 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF70Q9UC06 446 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 PCDHGB6Q9Y5F9 930 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 MAGED1Q9Y5V3 778 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 KRBOX1C9JBD0 128 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 RFPL3O75679 317 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 RECQL5O94762 991 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 LSM8O95777 96 aaKnown RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 ANGPTL1O95841 491 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 ACADLP28330 430 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 L1CAMP32004 1257 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 CSTF2P33240 577 aaKnown RBP eCLIP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 GABRB2P47870 512 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 UGT2B15P54855 530 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 AP1S2P56377 157 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 SESN2P58004 480 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 SNAPC1Q16533 368 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 BRMS1LQ5PSV4 323 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 RIOX2Q8IUF8 465 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 FAM71AQ8IYT1 594 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 PHTF2Q8N3S3 785 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 ZUFSPQ96AP4 578 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 APBA2Q99767 749 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 TRAF4Q9BUZ4 470 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 FGFBP2Q9BYJ0 223 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 ENOPH1Q9UHY7 261 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 B4GALT4O60513 344 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 CHRM5P08912 532 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 CHRNB2P17787 502 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 AKAP5P24588 427 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 HADHBP55084 474 aaKnown RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 SLC9A5Q14940 896 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 GDPD1Q8N9F7 314 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 PHF10Q8WUB8 498 aaKnown RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 NR4A3Q92570 626 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 KAT5Q92993 513 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 ACSF2Q96CM8 615 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-202ENST00000378161 LGALS12Q96DT0 336 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 NIPAL2Q9H841 368 aa11.68□□□□□ -0.54
NPHP4-202ENST00000378161 DNPEPQ9ULA0 475 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms