RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 CACNG1Q06432 222 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 DGCR6Q14129 220 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBC1D3GQ6DHY5 549 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBC1D3CQ6IPX1 549 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 GET4Q7L5D6 327 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 ZDHHC14Q8IZN3 488 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TBC1D3Q8IZP1 549 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 PGAM4Q8N0Y7 254 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 LPGAT1Q92604 370 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 PIWIL1Q96J94 861 aaKnown RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 DKK3Q9UBP4 350 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 ISM1B1AKI9 464 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 CACNB4O00305 520 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 POP4O95707 220 aaKnown RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 IFNGR2P38484 337 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 CHRNA4P43681 627 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 OLIG2Q13516 323 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 RELL1Q8IUW5 271 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 WDR48Q8TAF3 677 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 DNAJC1Q96KC8 554 aaKnown RBP14.92□□□□□ -0.02
NPHP4-201ENST00000378156 B3GALT6Q96L58 329 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 ACAT2Q9BWD1 397 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 FAM83DQ9H4H8 585 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 C8orf4Q9NR00 106 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 AASDHPPTQ9NRN7 309 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 TLR6Q9Y2C9 796 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 MFHAS1Q9Y4C4 1052 aa14.92□□□□□ -0.02
NPHP4-201ENST00000378156 ALS2Q96Q42 1657 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 TIAM2Q8IVF5 1701 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 SLC9B1Q4ZJI4 515 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 TPGS2Q68CL5 300 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 CACTIN-AS1Q8N1I8 211 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 WDTC1Q8N5D0 677 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 PQLC3Q8N755 202 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 DCBLD1Q8N8Z6 715 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 ADCY4Q8NFM4 1077 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 KCTD13Q8WZ19 329 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 ZNF624Q9P2J8 865 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-201ENST00000378156 GNEQ9Y223 722 aaKnown RBP14.91□□□□□ -0.02
NPHP4-201ENST00000378156 TIMM22Q9Y584 194 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 NPEPPSL1A6NEC2 478 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 TYROBPO43914 113 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 NDUFS2O75306 463 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 PRAMEF1O95521 474 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 HOXB6P17509 224 aaKnown RBP14.91□□□□□ -0.02
NPHP4-201ENST00000378156 SLC18A2Q05940 514 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 ELP6Q0PNE2 266 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 ZNF549Q6P9A3 640 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 COLGALT2Q8IYK4 626 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 BEND7Q8N7W2 519 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-201ENST00000378156 BRSK1Q8TDC3 778 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 UBXN8O00124 270 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 PRNPP04156 253 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 APODP05090 189 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 RFX4Q33E94 735 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 C6orf52Q5T4I8 152 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 TMEM198Q66K66 360 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 TAPT1Q6NXT6 567 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 SPESP1Q6UW49 350 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 C15orf39Q6ZRI6 1047 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 HFE2Q6ZVN8 426 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 CPA6Q8N4T0 437 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 UBR7Q8N806 425 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 FAM47BQ8NA70 645 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 MFSD1Q9H3U5 465 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 CCNB1IP1Q9NPC3 277 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 SLC27A6Q9Y2P4 619 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 TMA7Q9Y2S6 64 aaKnown RBP14.91□□□□□ -0.02
NPHP4-201ENST00000378156 STON1Q9Y6Q2 735 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 SLC7A4O43246 635 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 TSPAN9O75954 239 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 ACRP10323 421 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 GUCA1AP43080 201 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-201ENST00000378156 ATP12AP54707 1039 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 GNA13Q14344 377 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 ZFP28Q8NHY6 868 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 MYDGFQ969H8 173 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 FCF1Q9Y324 198 aaKnown RBP14.91□□□□□ -0.02
NPHP4-201ENST00000378156 MYH7P12883 1935 aa14.91□□□□□ -0.02
NPHP4-201ENST00000378156 CCDC182A6NF36 153 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 NEMP2A6NFY4 417 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 AOC2O75106 756 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 SLC22A3O75751 556 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 IVDP26440 423 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 CDH5P33151 784 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-201ENST00000378156 ZNF132P52740 706 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 ACTR3P61158 418 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 VPS26BQ4G0F5 336 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 PERM1Q5SV97 790 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 CWF19L1Q69YN2 538 aaKnown RBP14.9□□□□□ -0.02
NPHP4-201ENST00000378156 SLC9A4Q6AI14 798 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 PANX1Q96RD7 426 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 SH3GLB1Q9Y371 365 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 MYH15Q9Y2K3 1946 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 H3BM21 787 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 EPHX1P07099 455 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 EPORP19235 508 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 NOS3P29474 1203 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 AP2M1Q96CW1 435 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms