RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 C1orf74Q96LT6 269 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 KCNA7Q96RP8 456 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 ADNPQ9H2P0 1102 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 TRPV5Q9NQA5 729 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 ABI2Q9NYB9 513 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 ANAPC2Q9UJX6 822 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 DGKBQ9Y6T7 804 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 PTPRDP23468 1912 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 H0YAE9 185 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 PIP5K1BO14986 540 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 GPR182O15218 404 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 DNAJB14Q8TBM8 379 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 SEPHS2Q99611 448 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 WARS2Q9UGM6 360 aaKnown RBP16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 PADI3Q9ULW8 664 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 SLC27A5Q9Y2P5 690 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 ARL5AQ9Y689 179 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 GOT2P00505 430 aaKnown RBP16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 SLC2A3P11169 496 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 ZNF157P51786 506 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 PLA2G16P53816 162 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 RAD23AP54725 363 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 TIAL1Q01085 375 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 OR4D1Q15615 310 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 DDR2Q16832 855 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 SLC39A12Q504Y0 691 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 FBXO48Q5FWF7 155 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 MS4A13Q5J8X5 152 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 GTF2IRD2BQ6EKJ0 949 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 GALNT7Q86SF2 657 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 GTF2IRD2Q86UP8 949 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 PDZD8Q8NEN9 1154 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 ARRDC2Q8TBH0 407 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 BLOC1S5Q8TDH9 187 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 TWIST2Q8WVJ9 160 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 ZYG11BQ9C0D3 744 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 PCDHA9Q9Y5H5 950 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 V9GYQ6 96 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 BRCA2P51587 3418 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 ANKRD12Q6UB98 2062 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 DYTNA2CJ06 578 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 ABCB7O75027 752 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 ATXN1LP0C7T5 689 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 PIRTP0C851 137 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 NR4A1P22736 598 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 SLC26A3P40879 764 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 GPR15P49685 360 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 NRG1Q02297 640 aaPredicted RBP16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 YWHAHQ04917 246 aaPredicted RBP16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 RPS6KA2Q15349 733 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 ZNF683Q8IZ20 524 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 CADM3Q8N126 398 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 HPS1Q92902 700 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 ALG2Q9H553 416 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 PRDM5Q9NQX1 630 aaPredicted RBP16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 SACM1LQ9NTJ5 587 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 GMIPQ9P107 970 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 TLR6Q9Y2C9 796 aa16.46■□□□□ 0.23
PCDHA1-201ENST00000378133 DOCK4Q8N1I0 1966 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 TCRBV5S2A0A599 114 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 RSL1D1O76021 490 aaKnown RBP16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 GLP2RO95838 553 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 TBX18O95935 607 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 MTHFD2P13995 350 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 RHOQP17081 205 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 GSK3BP49841 420 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 TBX4P57082 545 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 TUSC3Q13454 348 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 IRF5Q13568 498 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 SEMA3AQ14563 771 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 SPCS2Q15005 226 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 CLPPQ16740 277 aaPredicted RBP16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 LEMD2Q8NC56 503 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 SLC39A13Q96H72 371 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 KCTD14Q9BQ13 255 aaPredicted RBP16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 BDH2Q9BUT1 245 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 HMG20AQ9NP66 347 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 Q9Y3F1 56 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 SPO11Q9Y5K1 396 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 NLRC5Q86WI3 1866 aa16.46■□□□□ 0.22
PCDHA1-201ENST00000378133 CCDC162PA2VCL2 907 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 H3BMM5 538 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 AZIN1O14977 448 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 CD3EAPO15446 510 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 LINC00032P0C843 101 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 FDXRP22570 491 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 SHMT2P34897 504 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 HPCAL1P37235 193 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 NFKB2Q00653 900 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 FUT11Q495W5 492 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 RABL3Q5HYI8 236 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 CRTC3Q6UUV7 619 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 CIR1Q86X95 450 aaPredicted RBP16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 OR13C4Q8NGS5 318 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 IGSF8Q969P0 613 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 TUBGCP3Q96CW5 907 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 MAGED4Q96JG8 741 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 TUBB1Q9H4B7 451 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 BTRCQ9Y297 605 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 TDRD15B5MCY1 1934 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms