RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 S100A6P06703 90 aa16.21■□□□□ 0.18
RGP1-201ENST00000378078 TKTP29401 623 aaKnown RBP16.21■□□□□ 0.18
RGP1-201ENST00000378078 RRP1BQ14684 758 aaKnown RBP16.21■□□□□ 0.18
RGP1-201ENST00000378078 LARS2Q15031 903 aaKnown RBP16.21■□□□□ 0.18
RGP1-201ENST00000378078 C12orf66Q96MD2 445 aa16.21■□□□□ 0.18
RGP1-201ENST00000378078 TBC1D10AQ9BXI6 508 aa16.21■□□□□ 0.18
RGP1-201ENST00000378078 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.21■□□□□ 0.182e-9■■□□□ 12
RGP1-201ENST00000378078 SNX15Q9NRS6 342 aa16.21■□□□□ 0.18
RGP1-201ENST00000378078 CLDN4O14493 209 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 ZNF823P16415 610 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 IDSP22304 550 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 PAX7P23759 505 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 GANABQ14697 944 aaKnown RBP16.2■□□□□ 0.18
RGP1-201ENST00000378078 TMEM220Q6QAJ8 160 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 FAM13CQ8NE31 585 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 ETNPPLQ8TBG4 499 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 ASB2Q96Q27 587 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 ASTN2O75129 1339 aaPredicted RBP16.2■□□□□ 0.18
RGP1-201ENST00000378078 SIGLEC16A6NMB1 481 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 AHCYL1O43865 530 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 ITGB1P05556 798 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 HKDC1Q2TB90 917 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 C9orf57Q5W0N0 161 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 UCKL1Q9NWZ5 548 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 SLC35F4A4IF30 521 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 APOC4-APOC2K7ER74 178 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 APOC2P02655 101 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 GJA1P17302 382 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 UQCRC1P31930 480 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 MAPK12P53778 367 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 ZMYND11Q15326 602 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 KCNK18Q7Z418 384 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 ZNF398Q8TD17 642 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 NOL11Q9H8H0 719 aaKnown RBP16.2■□□□□ 0.18
RGP1-201ENST00000378078 MED14O60244 1454 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 CABYRO75952 493 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 OAZ2O95190 189 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 ZNF844Q08AG5 666 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 EIF2S3LQ2VIR3 472 aaKnown RBP16.2■□□□□ 0.18
RGP1-201ENST00000378078 METTL3Q86U44 580 aaKnown RBP16.2■□□□□ 0.18
RGP1-201ENST00000378078 CRYBG2Q8N1P7 616 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 L1RE1Q9UN81 338 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 PSMG1O95456 288 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 LAMP2P13473 410 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 MPSTP25325 297 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 CLCN5P51795 746 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 RPL7AP62424 266 aaKnown RBP16.2■□□□□ 0.18
RGP1-201ENST00000378078 PYHIN1Q6K0P9 492 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 ZCCHC9Q8N567 271 aaKnown RBP16.2■□□□□ 0.18
RGP1-201ENST00000378078 DENND6BQ8NEG7 585 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 MNTQ99583 582 aa16.2■□□□□ 0.18
RGP1-201ENST00000378078 PRKAA2P54646 552 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 DSC2Q02487 901 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 ABRAXAS1Q6UWZ7 409 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 RIOX2Q8IUF8 465 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 UNC5BQ8IZJ1 945 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 EFHD2Q96C19 240 aaPredicted RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 MSCO60682 206 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 MMP3P08254 477 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 MCCD1P59942 119 aaPredicted RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 VBP1P61758 197 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 OR5B17Q8NGF7 314 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 CNDP2Q96KP4 475 aaKnown RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 ZNF226Q9NYT6 803 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 ZNF224Q9NZL3 707 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 ADSSP30520 456 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 CRYBB1P53674 252 aaPredicted RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 TTTY10Q9BZA0 68 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 CPS1P31327 1500 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 CHADO15335 359 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 HSD11B1P28845 292 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 ECHS1P30084 290 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 TRIM28Q13263 835 aaKnown RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 CWF19L1Q69YN2 538 aaKnown RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 KYAT3Q6YP21 454 aaKnown RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 RBM44Q6ZP01 1051 aaKnown RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 THAP5Q7Z6K1 395 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 ARL10Q8N8L6 244 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 ZNF570Q96NI8 536 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 CDT1Q9H211 546 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 DPEP3Q9H4B8 488 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 DKK3Q9UBP4 350 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 PCDHGC4Q9Y5F7 938 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 E9PAM4 449 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 SLC22A3O75751 556 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 MYCLP1P12525 358 aaPredicted RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 AP1S2P56377 157 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 ABCA11PQ4W5N1 156 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 HMCESQ96FZ2 354 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 MFSD14AQ96MC6 490 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 EHD4Q9H223 541 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 IKZF4Q9H2S9 585 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 C1orf167Q5SNV9 1468 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 SLC33A1O00400 549 aaPredicted RBP16.19■□□□□ 0.18
RGP1-201ENST00000378078 METTL18O95568 372 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 BNIP1Q12981 228 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 CAPSQ13938 189 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
RGP1-201ENST00000378078 OR2L8Q8NGY9 312 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms