RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 FTH1P02794 183 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 ITGB6P18564 788 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 CD40LGP29965 261 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 ILF2Q12905 390 aaKnown RBP15.74■□□□□ 0.11
CKAP4-201ENST00000378026 MINDY2Q8NBR6 621 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 OR13J1Q8NGT2 312 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 FAR1Q8WVX9 515 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 VMP1Q96GC9 406 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 TNIP3Q96KP6 325 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 SLC2A13Q96QE2 648 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 TBCDQ9BTW9 1192 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 TIMM13Q9Y5L4 95 aaPredicted RBP15.74■□□□□ 0.11
CKAP4-201ENST00000378026 CHRNA1P02708 482 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 RAP2AP10114 183 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 PCMT1P22061 227 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 SERPINB10P48595 397 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 GEMP55040 296 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 WNT3AP56704 352 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 EEFSECP57772 596 aaKnown RBP15.73■□□□□ 0.11
CKAP4-201ENST00000378026 RCAN2Q14206 197 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 HIST2H2ACQ16777 129 aaPredicted RBP15.73■□□□□ 0.11
CKAP4-201ENST00000378026 BNIPLQ7Z465 357 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 HEATR4Q86WZ0 1026 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 TMEM199Q8N511 208 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 LRRC52Q8N7C0 313 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 FCRL5Q96RD9 977 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 IFT52Q9Y366 437 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 RLFQ13129 1914 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 LOC100130705A0A1B0GUX0 176 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 GSTA4O15217 222 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 ASNA1O43681 348 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 FADS2O95864 444 aaKnown RBP15.73■□□□□ 0.11
CKAP4-201ENST00000378026 DNAJB2P25686 324 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 DGKQP52824 942 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 FOXM1Q08050 763 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 COLEC12Q5KU26 742 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 KANK2Q63ZY3 851 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 TAS2R42Q7RTR8 314 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 PROSER1Q86XN7 944 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 AURKBQ96GD4 344 aaPredicted RBP15.73■□□□□ 0.11
CKAP4-201ENST00000378026 LRRC3Q9BY71 257 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 NFKBIZQ9BYH8 718 aa15.73■□□□□ 0.11
CKAP4-201ENST00000378026 POLR3BQ9NW08 1133 aaPredicted RBP15.73■□□□□ 0.11
CKAP4-201ENST00000378026 ANKRD34BA5PLL1 514 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 C19orf81C9J6K1 198 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 ENPP3O14638 875 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 GOT2P00505 430 aaKnown RBP15.72■□□□□ 0.11
CKAP4-201ENST00000378026 SPNP16150 400 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 PAX3P23760 479 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 GTF2E2P29084 291 aaKnown RBP15.72■□□□□ 0.11
CKAP4-201ENST00000378026 HNRNPFP52597 415 aaKnown RBP15.72■□□□□ 0.11
CKAP4-201ENST00000378026 SIM2Q14190 667 aaPredicted RBP15.72■□□□□ 0.11
CKAP4-201ENST00000378026 NKG7Q16617 165 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 KRT27Q7Z3Y8 459 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 P2RY8Q86VZ1 359 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 CILP2Q8IUL8 1156 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 FNDC5Q8NAU1 212 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 NTAN1Q96AB6 310 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 ASPSCR1Q9BZE9 553 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 CEP44Q9C0F1 390 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 SLC39A8Q9C0K1 460 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 ENTPD7Q9NQZ7 604 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 PCDHGA3Q9Y5H0 932 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 MITFO75030 526 aaPredicted RBP15.72■□□□□ 0.11
CKAP4-201ENST00000378026 ANXA6P08133 673 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 CD1DP15813 335 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 HTR1EP28566 365 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 BMPR1AP36894 532 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 ALDH7A1P49419 539 aaKnown RBP15.72■□□□□ 0.11
CKAP4-201ENST00000378026 TRIP4Q15650 581 aaPredicted RBP15.72■□□□□ 0.11
CKAP4-201ENST00000378026 KYAT1Q16773 422 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 LRIT3Q3SXY7 679 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 UBE2UQ5VVX9 321 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 DCAF15Q66K64 600 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 CYP2U1Q7Z449 544 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 PLD3Q8IV08 490 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 C17orf80Q9BSJ5 609 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 HOXD1Q9GZZ0 328 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 NACA2Q9H009 215 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 TRIT1Q9H3H1 467 aaKnown RBP15.72■□□□□ 0.11
CKAP4-201ENST00000378026 FAM124BQ9H5Z6 455 aaPredicted RBP15.72■□□□□ 0.11
CKAP4-201ENST00000378026 PSME4Q14997 1843 aa15.72■□□□□ 0.11
CKAP4-201ENST00000378026 GABARAPO95166 117 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 ITIH1P19827 911 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 ZFP36L2P47974 494 aaKnown RBP15.71■□□□□ 0.11
CKAP4-201ENST00000378026 DAOAP59103 153 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 SOX4Q06945 474 aaPredicted RBP15.71■□□□□ 0.11
CKAP4-201ENST00000378026 WSCD1Q658N2 575 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 ARMCX2Q7L311 632 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 SLC22A15Q8IZD6 547 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 CALML6Q8TD86 181 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 ZNF486Q96H40 463 aaPredicted RBP15.71■□□□□ 0.11
CKAP4-201ENST00000378026 C6orf62Q9GZU0 229 aaPredicted RBP15.71■□□□□ 0.11
CKAP4-201ENST00000378026 MUC13Q9H3R2 512 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 SOCS7O14512 581 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 SLC22A1O15245 554 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 GUCY1B2O75343 617 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 EEDO75530 441 aaKnown RBP15.71■□□□□ 0.11
CKAP4-201ENST00000378026 ANGPTL1O95841 491 aa15.71■□□□□ 0.11
CKAP4-201ENST00000378026 FGF4P08620 206 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms