RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 SPATA22Q8NHS9 363 aa17.18■□□□□ 0.34
HLA-A-201ENST00000376802 SLC35G2Q8TBE7 412 aa17.18■□□□□ 0.34
HLA-A-201ENST00000376802 STARD8Q92502 1023 aa17.18■□□□□ 0.34
HLA-A-201ENST00000376802 RNF31Q96EP0 1072 aa17.18■□□□□ 0.34
HLA-A-201ENST00000376802 EFHD1Q9BUP0 239 aa17.18■□□□□ 0.34
HLA-A-201ENST00000376802 ZNF71Q9NQZ8 489 aaPredicted RBP17.18■□□□□ 0.34
HLA-A-201ENST00000376802 RAD18Q9NS91 495 aa17.18■□□□□ 0.34
HLA-A-201ENST00000376802 MRPS18BQ9Y676 258 aaKnown RBP17.18■□□□□ 0.34
HLA-A-201ENST00000376802 KMOO15229 486 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 UBXN7O94888 489 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 VIPP01282 170 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 SLC4A1P02730 911 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 TMEM253P0C7T8 217 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 LEPRP48357 1165 aaKnown RBP17.17■□□□□ 0.34
HLA-A-201ENST00000376802 SH3BP2P78314 561 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 PDK1Q15118 436 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 SLC14A2Q15849 920 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 INSCQ1MX18 579 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 DEFB109BQ30KR1 87 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 COLEC12Q5KU26 742 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 C11orf96Q7Z7L8 435 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 LRRTM4Q86VH4 590 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 ESX1Q8N693 406 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 APOBEC4Q8WW27 367 aaKnown RBP17.17■□□□□ 0.34
HLA-A-201ENST00000376802 TGM7Q96PF1 710 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 DNAJC7Q99615 494 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 TIMM29Q9BSF4 260 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 GPR63Q9BZJ6 419 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 SLC40A1Q9NP59 571 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 DNAJC16Q9Y2G8 782 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 RPS6KL1Q9Y6S9 549 aa17.17■□□□□ 0.34
HLA-A-201ENST00000376802 SPENQ96T58 3664 aaKnown RBP17.17■□□□□ 0.34
HLA-A-201ENST00000376802 APOL1O14791 398 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 TOX3O15405 576 aaPredicted RBP17.16■□□□□ 0.34
HLA-A-201ENST00000376802 KIF1CO43896 1103 aaKnown RBP17.16■□□□□ 0.34
HLA-A-201ENST00000376802 VEGFDO43915 354 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 MTA2O94776 668 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 RPL10P27635 214 aaKnown RBP17.16■□□□□ 0.34
HLA-A-201ENST00000376802 CASRP41180 1078 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 SRSF1Q07955 248 aaKnown RBP eCLIP17.16■□□□□ 0.34
HLA-A-201ENST00000376802 FOXM1Q08050 763 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 SEPT7Q16181 437 aaKnown RBP17.16■□□□□ 0.34
HLA-A-201ENST00000376802 WASH2PQ6VEQ5 465 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 C9orf43Q8TAL5 461 aaPredicted RBP17.16■□□□□ 0.34
HLA-A-201ENST00000376802 RSC1A1Q92681 617 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 ABHD17AQ96GS6 310 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 ULBP3Q9BZM4 244 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 XPO4Q9C0E2 1151 aaKnown RBP17.16■□□□□ 0.34
HLA-A-201ENST00000376802 ZNF768Q9H5H4 540 aaKnown RBP17.16■□□□□ 0.34
HLA-A-201ENST00000376802 GLOD4Q9HC38 313 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 WASH6PQ9NQA3 447 aa17.16■□□□□ 0.34
HLA-A-201ENST00000376802 OR52A4PA6NMU1 304 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 PDZK1P1A8MUH7 402 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 CDK14O94921 469 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 NDST3O95803 873 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 TCN2P20062 427 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 NOP2P46087 812 aaKnown RBP17.15■□□□□ 0.34
HLA-A-201ENST00000376802 SEPHS1P49903 392 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 MC1RQ01726 317 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 GPR18Q14330 331 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 ATP13A5Q4VNC0 1218 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 TEX44Q53QW1 395 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 AGAP9Q5VTM2 703 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 C16orf46Q6P387 395 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 KLHL6Q8WZ60 621 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 VPS35Q96QK1 796 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 MAK16Q9BXY0 300 aaKnown RBP17.15■□□□□ 0.34
HLA-A-201ENST00000376802 BPIFA1Q9NP55 256 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 UBP1Q9NZI7 540 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 ANAPC2Q9UJX6 822 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 WDR37Q9Y2I8 494 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.15■□□□□ 0.34
HLA-A-201ENST00000376802 KCNMB2Q9Y691 235 aa17.15■□□□□ 0.34
HLA-A-201ENST00000376802 SSU72P8A0A1W2PR75 194 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 GOLGA6L19H0YKK7 550 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 PPP1R12AO14974 1030 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-201ENST00000376802 PMPCBO75439 489 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 FURINP09958 794 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 AMD1P17707 334 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 CD68P34810 354 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-201ENST00000376802 CA5AP35218 305 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 ARHGAP25P42331 645 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 DRG2P55039 364 aaKnown RBP17.14■□□□□ 0.33
HLA-A-201ENST00000376802 FOXK1P85037 733 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 TMEM115Q12893 351 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-201ENST00000376802 IL11RAQ14626 422 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 PRKD1Q15139 912 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-201ENST00000376802 NOMO1Q15155 1222 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 IGFBP7Q16270 282 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 LRRC38Q5VT99 294 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 C6orf15Q6UXA7 325 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-201ENST00000376802 PRSS42Q7Z5A4 293 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 TRIM48Q8IWZ4 208 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 GALNT6Q8NCL4 622 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 OR8K1Q8NGG5 319 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-201ENST00000376802 RNF25Q96BH1 459 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-201ENST00000376802 TEKT5Q96M29 485 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 OR6C1Q96RD1 312 aa17.14■□□□□ 0.33
HLA-A-201ENST00000376802 CHP1Q99653 195 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms