RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MTSS1O43312 755 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 LIFP15018 202 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 XRCC1P18887 633 aaPredicted RBP20.73■□□□□ 0.91
VSX1-201ENST00000376707 NFKB1P19838 968 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 FECHP22830 423 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 ZNF75DP51815 510 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 WASHC5Q12768 1159 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 SPA17Q15506 151 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 SEPT7Q16181 437 aaKnown RBP20.73■□□□□ 0.91
VSX1-201ENST00000376707 GDAP1Q8TB36 358 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 P3H4Q92791 437 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 VPS35Q96QK1 796 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 PANX2Q96RD6 677 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 ZPBPQ9BS86 351 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 TIMM29Q9BSF4 260 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 SLC12A9Q9BXP2 914 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 GOLPH3Q9H4A6 298 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 UCK1Q9HA47 277 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 LUC7LQ9NQ29 371 aaKnown RBP20.73■□□□□ 0.91
VSX1-201ENST00000376707 FBXO8Q9NRD0 319 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 SCHIP1Q9P0W5 487 aaPredicted RBP20.73■□□□□ 0.91
VSX1-201ENST00000376707 KLHL8Q9P2G9 620 aaPredicted RBP20.73■□□□□ 0.91
VSX1-201ENST00000376707 PILRAQ9UKJ1 303 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 ZFC3H1O60293 1989 aaKnown RBP20.73■□□□□ 0.91
VSX1-201ENST00000376707 SDK2Q58EX2 2172 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 CD68P34810 354 aaPredicted RBP20.72■□□□□ 0.91
VSX1-201ENST00000376707 CYLC1P35663 651 aaPredicted RBP20.72■□□□□ 0.91
VSX1-201ENST00000376707 WNT3AP56704 352 aa20.72■□□□□ 0.91
VSX1-201ENST00000376707 GTF2H3Q13889 308 aa20.72■□□□□ 0.91
VSX1-201ENST00000376707 TFDP3Q5H9I0 405 aa20.72■□□□□ 0.91
VSX1-201ENST00000376707 TMEM26Q6ZUK4 368 aa20.72■□□□□ 0.91
VSX1-201ENST00000376707 ZC3H18Q86VM9 953 aaKnown RBP20.72■□□□□ 0.91
VSX1-201ENST00000376707 RCOR2Q8IZ40 523 aa20.72■□□□□ 0.91
VSX1-201ENST00000376707 NLGN4XQ8N0W4 816 aa20.72■□□□□ 0.91
VSX1-201ENST00000376707 NLGN4YQ8NFZ3 816 aaPredicted RBP20.72■□□□□ 0.91
VSX1-201ENST00000376707 TRABDQ9H4I3 376 aa20.72■□□□□ 0.91
VSX1-201ENST00000376707 TFR2Q9UP52 801 aa20.72■□□□□ 0.91
VSX1-201ENST00000376707 LOC285095A0A1B0GVY8 99 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 F5H423 210 aaPredicted RBP20.71■□□□□ 0.91
VSX1-201ENST00000376707 UBXN7O94888 489 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 ZRANB2O95218 330 aaKnown RBP eCLIP20.71■□□□□ 0.91
VSX1-201ENST00000376707 TYRP1P17643 537 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 AMD1P17707 334 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 VCLP18206 1134 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 IDSP22304 550 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 HMGCLP35914 325 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 SLC19A1P41440 591 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 ADCY2Q08462 1091 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 NOMO1Q15155 1222 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 ATP13A5Q4VNC0 1218 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 KHDC1Q4VXA5 237 aaKnown RBP20.71■□□□□ 0.91
VSX1-201ENST00000376707 KDELC1Q6UW63 502 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 PID1Q7Z2X4 250 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 TRAPPC5Q8IUR0 188 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 CCDC50Q8IVM0 306 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 ZNF547Q8IVP9 402 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 SLC25A41Q8N5S1 370 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 KIAA1143Q96AT1 154 aaPredicted RBP20.71■□□□□ 0.91
VSX1-201ENST00000376707 HAUS1Q96CS2 278 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 TTC25Q96NG3 672 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 RBSNQ9H1K0 784 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 GPN2Q9H9Y4 310 aaPredicted RBP20.71■□□□□ 0.91
VSX1-201ENST00000376707 APMAPQ9HDC9 416 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 STARD5Q9NSY2 213 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 ZNF624Q9P2J8 865 aaPredicted RBP20.71■□□□□ 0.91
VSX1-201ENST00000376707 TMPRSS11EQ9UL52 423 aa20.71■□□□□ 0.91
VSX1-201ENST00000376707 EPN1Q9Y6I3 576 aaPredicted RBP20.71■□□□□ 0.91
VSX1-201ENST00000376707 MN1Q10571 1320 aaPredicted RBP20.71■□□□□ 0.91
VSX1-201ENST00000376707 hCG_1818297A0A087WSY0 165 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 ZNF891A8MT65 544 aaPredicted RBP20.7■□□□□ 0.9
VSX1-201ENST00000376707 PYCARD-AS1I3L0S3 204 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 POLR1CO15160 346 aaPredicted RBP20.7■□□□□ 0.9
VSX1-201ENST00000376707 CAPN5O15484 640 aaPredicted RBP20.7■□□□□ 0.9
VSX1-201ENST00000376707 EPOP01588 193 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 ANKRD34CP0C6C1 535 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 RPL10P27635 214 aaKnown RBP20.7■□□□□ 0.9
VSX1-201ENST00000376707 MAP4P27816 1152 aaKnown RBP20.7■□□□□ 0.9
VSX1-201ENST00000376707 MARCKSL1P49006 195 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 GFERP55789 205 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 TMEM115Q12893 351 aaPredicted RBP20.7■□□□□ 0.9
VSX1-201ENST00000376707 SIRPB2Q5JXA9 342 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 ZDHHC20Q5W0Z9 365 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 BORAQ6PGQ7 559 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 ABRAXAS1Q6UWZ7 409 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 CALR3Q96L12 384 aaKnown RBP20.7■□□□□ 0.9
VSX1-201ENST00000376707 C9orf72Q96LT7 481 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 FCRL5Q96RD9 977 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 VAT1Q99536 393 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 IL26Q9NPH9 171 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 POT1Q9NUX5 634 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 OGFRQ9NZT2 677 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 HACD3Q9P035 362 aa20.7■□□□□ 0.9
VSX1-201ENST00000376707 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.7■□□□□ 0.9
VSX1-201ENST00000376707 STK17BO94768 372 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 NDUFA10O95299 355 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 C9P02748 559 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 ITGB6P18564 788 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 SPAM1P38567 509 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 CHRNA4P43681 627 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 DRG2P55039 364 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms