RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 AGAP9Q5VTM2 703 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 CRTC3Q6UUV7 619 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 ADGRG6Q86SQ4 1221 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 CNGA4Q8IV77 575 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 GPR26Q8NDV2 337 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 TFB1MQ8WVM0 346 aaKnown RBP14.54□□□□□ -0.08
HDAC6-204ENST00000376643 CXorf40BQ96DE9 158 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 ZDHHC12Q96GR4 267 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 C9orf72Q96LT7 481 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 PACSIN1Q9BY11 444 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 GLOD4Q9HC38 313 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 KLHL3Q9UH77 587 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 FAM153AQ9UHL3 310 aa14.54□□□□□ -0.08
HDAC6-204ENST00000376643 SDK2Q58EX2 2172 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 ZFC3H1O60293 1989 aaKnown RBP14.53□□□□□ -0.08
HDAC6-204ENST00000376643 TERTO14746 1132 aaKnown RBP14.53□□□□□ -0.08
HDAC6-204ENST00000376643 PSTPIP1O43586 416 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 C9P02748 559 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 MT-ND3P03897 115 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 WT1P19544 449 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-204ENST00000376643 ARSDP51689 593 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 CYP4F2P78329 520 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 CDC20Q12834 499 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 ITGA9Q13797 1035 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 SKOR2Q2VWA4 1001 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-204ENST00000376643 ABRAXAS1Q6UWZ7 409 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 TRAPPC5Q8IUR0 188 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 GDAP1Q8TB36 358 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 APOBEC4Q8WW27 367 aaKnown RBP14.53□□□□□ -0.08
HDAC6-204ENST00000376643 SEC14L1Q92503 715 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 PMEPA1Q969W9 287 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 TADA1Q96BN2 335 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 ULBP3Q9BZM4 244 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 LUC7LQ9NQ29 371 aaKnown RBP14.53□□□□□ -0.08
HDAC6-204ENST00000376643 PRDM8Q9NQV8 689 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 ABHD10Q9NUJ1 306 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 ANAPC2Q9UJX6 822 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.53□□□□□ -0.08
HDAC6-204ENST00000376643 KCTD3Q9Y597 815 aa14.53□□□□□ -0.08
HDAC6-204ENST00000376643 C3orf70A6NLC5 250 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-204ENST00000376643 ZNF189O75820 626 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-204ENST00000376643 RASSF9O75901 435 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 BPIP17213 487 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 TCN2P20062 427 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 CAPZBP47756 277 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 FOXM1Q08050 763 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 CLCA4Q14CN2 919 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 TCEAL1Q15170 157 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 LDLRAP1Q5SW96 308 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 PRSS42Q7Z5A4 293 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 BPHLQ86WA6 291 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-204ENST00000376643 P3H4Q92791 437 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 ZNF514Q96K75 400 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-204ENST00000376643 TEKT5Q96M29 485 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 CTRCQ99895 268 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 TBC1D10AQ9BXI6 508 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 SPRY4Q9C004 299 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 RAB33BQ9H082 229 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 ZNF768Q9H5H4 540 aaKnown RBP14.52□□□□□ -0.09
HDAC6-204ENST00000376643 NHEJ1Q9H9Q4 299 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-204ENST00000376643 KCND3Q9UK17 655 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 DNAJC16Q9Y2G8 782 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 PKP3Q9Y446 797 aa14.52□□□□□ -0.09
HDAC6-204ENST00000376643 PCYT1BQ9Y5K3 369 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-204ENST00000376643 DNMT3AQ9Y6K1 912 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-204ENST00000376643 ARHGAP6O43182 974 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 MFAP3LO75121 409 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 PMPCBO75439 489 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 DLGAP3O95886 979 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 PYGMP11217 842 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 HLA-DPA1P20036 260 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 PTPN3P26045 913 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 SPAM1P38567 509 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 STAT5AP42229 794 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 DYNLT1P63172 113 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 PRKD1Q15139 912 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-204ENST00000376643 C6orf15Q6UXA7 325 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-204ENST00000376643 CPNE8Q86YQ8 564 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 BEND7Q8N7W2 519 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-204ENST00000376643 C9orf43Q8TAL5 461 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-204ENST00000376643 LRRN4Q8WUT4 740 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 STARD8Q92502 1023 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 UBXN4Q92575 508 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 RNF25Q96BH1 459 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-204ENST00000376643 LRRC45Q96CN5 670 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 EID2BQ96D98 161 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 STAMBPL1Q96FJ0 436 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 TGM7Q96PF1 710 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 FCRL4Q96PJ5 515 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 FSD1LQ9BXM9 530 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 CEP41Q9BYV8 373 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 SLC40A1Q9NP59 571 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 SIDT1Q9NXL6 827 aaKnown RBP14.51□□□□□ -0.09
HDAC6-204ENST00000376643 KLHL8Q9P2G9 620 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-204ENST00000376643 EPHA6Q9UF33 1036 aa14.51□□□□□ -0.09
HDAC6-204ENST00000376643 HACD1B0YJ81 288 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 MT-CYBP00156 380 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-204ENST00000376643 CCNYL3P0C7X3 344 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 PIRTP0C851 137 aa14.5□□□□□ -0.09
HDAC6-204ENST00000376643 SLC19A1P41440 591 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms