RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 MUC13Q9H3R2 512 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 PACSIN3Q9UKS6 424 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 APOC1P02654 83 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 C9P02748 559 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 CYP3A5P20815 502 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 TKTL1P51854 596 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 SLC18A2Q05940 514 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 TNK2Q07912 1038 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 ARHGAP15Q53QZ3 475 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 C10orf120Q5SQS8 335 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 FAM117BQ6P1L5 589 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 PIGWQ7Z7B1 504 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 TOP6BLQ8N6T0 577 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 TFB1MQ8WVM0 346 aaKnown RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 FBXL18Q96ME1 805 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 Q96MT0 163 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 KAT8Q9H7Z6 458 aaKnown RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 ACTR3BQ9P1U1 418 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 GLS2Q9UI32 602 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 AP4E1Q9UPM8 1137 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 TSHRP16473 764 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 RORAP35398 523 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 ASPAP45381 313 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 BST1Q10588 318 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 RNF151Q2KHN1 245 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 ZCCHC23Q6ZST2 131 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 SCUBE3Q8IX30 993 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 SPARTQ8N0X7 666 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 C1orf127Q8N9H9 656 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 C12orf66Q96MD2 445 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 ACSS3Q9H6R3 686 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 CYP4F12Q9HCS2 524 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 POLE4Q9NR33 117 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 DDIT4Q9NX09 232 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 AFF4Q9UHB7 1163 aaKnown RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 GSTK1Q9Y2Q3 226 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 PRRG1O14668 218 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 MAP3K6O95382 1288 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 OGNP20774 298 aaKnown RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 ETV3P41162 512 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 ALDH7A1P49419 539 aaKnown RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 ZNF81P51508 661 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 ARF3P61204 181 aaPredicted RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 ARF1P84077 181 aaKnown RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 GSTM4Q03013 218 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 VN1R5Q7Z5H4 357 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 DPPA2Q7Z7J5 298 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 SLC22A9Q8IVM8 553 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 OR2T34Q8NGX1 318 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 OR2T3Q8NH03 318 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 BORCS6Q96GS4 357 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 TEKT5Q96M29 485 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 ZNF512Q96ME7 567 aaPredicted RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 UROC1Q96N76 676 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 AP1S3Q96PC3 154 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 CIB1Q99828 191 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 APOBEC3GQ9HC16 384 aaKnown RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 CD320Q9NPF0 282 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 NCKAP1Q9Y2A7 1128 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 E5RJQ4 531 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 H3BN98 237 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 ERBB2P04626 1255 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 TNNI3P19429 210 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 ERVK-8P63133 956 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 E2F2Q14209 437 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 BATFQ16520 125 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 RNASE12Q5GAN4 147 aaKnown RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 PKN3Q6P5Z2 889 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 CLIP4Q8N3C7 705 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 OR52K2Q8NGK3 314 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 RCN3Q96D15 328 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 S100A13Q99584 98 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 SPATA9Q9BWV2 254 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 MKS1Q9NXB0 559 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 NDUFAF1Q9Y375 327 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 TIMM13Q9Y5L4 95 aaPredicted RBP6.54□□□□□ -1.36
CHD6-203ENST00000373233 TLL2Q9Y6L7 1015 aa6.54□□□□□ -1.36
CHD6-203ENST00000373233 PRPF4O43172 522 aaKnown RBP eCLIP6.53□□□□□ -1.363e-7■■□□□ 12.9
CHD6-203ENST00000373233 SEPT4O43236 478 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 AKT1P31749 480 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 MAN2A2P49641 1150 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 LSAMPQ13449 338 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 MADCAM1Q13477 382 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TARBP2Q15633 366 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 MFSD7Q6UXD7 560 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 PEG10Q86TG7 708 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 WDSUB1Q8N9V3 476 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 LPCAT1Q8NF37 534 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 BPIFB1Q8TDL5 484 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ASB15Q8WXK1 588 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TBCBQ99426 244 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 Q9Y3F1 56 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 STYXL1Q9Y6J8 313 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 MYO7AQ13402 2215 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TTLL8A6PVC2 850 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 NEDD8-MDP1E9PL57 170 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 AP3D1O14617 1153 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 SOAT2O75908 522 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 PTPN7P35236 360 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ASTE1Q2TB18 679 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms