RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SLC26A9Q7LBE3 791 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 PHYKPLQ8IUZ5 450 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 RAVER1Q8IY67 606 aaKnown RBP13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 OR10G6Q8NH81 332 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 PSMA8Q8TAA3 256 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 RCN3Q96D15 328 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 CDH19Q9H159 772 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 POLR3BQ9NW08 1133 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 SCGNO76038 276 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 STBD1O95210 358 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 DGKGP49619 791 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 RGS1Q08116 209 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 MFSD5Q6N075 450 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 CLYBLQ8N0X4 340 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 NACC2Q96BF6 587 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZHX1-C8orf76Q96EF9 292 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 FUBP3Q96I24 572 aaKnown RBP eCLIP13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 MRPL57Q9BQC6 102 aaKnown RBP13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 KLQ9UEF7 1012 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 CHP2O43745 196 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 BANF1O75531 89 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 STAT5AP42229 794 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 JAG1P78504 1218 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZNF549Q6P9A3 640 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 ADCY4Q8NFM4 1077 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 SELENOMQ8WWX9 145 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 EBNA1BP2Q99848 306 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 NTPCRQ9BSD7 190 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 CLN6Q9NWW5 311 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 C14orf166Q9Y224 244 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZNF536O15090 1300 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 NUDT14O95848 222 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 YBEYP58557 167 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 QPRTQ15274 297 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 CNSTQ6PJW8 725 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 PIWIL4Q7Z3Z4 852 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 BEND7Q8N7W2 519 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 PSME2Q9UL46 239 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 AP1M2Q9Y6Q5 423 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 DHRS12A0PJE2 317 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 MLYCDO95822 493 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 IL12AP29459 219 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 NOS3P29474 1203 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 MOGSQ13724 837 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 POTEHQ6S545 545 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 CRTC1Q6UUV9 634 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 MACC1Q6ZN28 852 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 MON1BQ7L1V2 547 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 OR4C6Q8NH72 309 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 FAXDC2Q96IV6 333 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 POLMQ9NP87 494 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 ASF1AQ9Y294 204 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 KCNU1A8MYU2 1149 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 GCATO75600 419 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 COX7A2P14406 83 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 FSHRP23945 695 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 RAB25P57735 213 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 INTS11Q5TA45 600 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 PROSER1Q86XN7 944 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 CYP4X1Q8N118 509 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 DEPDC4Q8N2C3 294 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 HDAC10Q969S8 669 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 MAPRE3Q9UPY8 281 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 RAI2Q9Y5P3 530 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 LRRC72A6NJI9 287 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 H3BM21 787 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 ITGA2BP08514 1039 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 CBX2Q14781 532 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 TAC4Q86UU9 113 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 FEM1CQ96JP0 617 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 Q96MT0 163 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 FAIM2Q9BWQ8 316 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 GULP1Q9UBP9 304 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 PACSIN3Q9UKS6 424 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 PSMD13Q9UNM6 376 aa13.23□□□□□ -0.29
RAPGEF1-201ENST00000372189 PAPSS1O43252 624 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 CCNDBP1O95273 360 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 COL6A1P12109 1028 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 PRKACBP22694 351 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 ADSLP30566 484 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 MAPKAPK2P49137 400 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 DENND5AQ6IQ26 1287 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 EIF3MQ7L2H7 374 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 PLCZ1Q86YW0 608 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 EFCAB3Q8N7B9 438 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 PTGR2Q8N8N7 351 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 DNAJC1Q96KC8 554 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 VPS45Q9NRW7 570 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 A0A0U1RQF3 1178 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 PCCBP05166 539 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 TRIM23P36406 574 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 RAB10P61026 200 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 GNA12Q03113 381 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 UBXN2BQ14CS0 331 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 SAPCD2Q86UD0 394 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 TNKS2Q9H2K2 1166 aa13.22□□□□□ -0.29
RAPGEF1-201ENST00000372189 CCNB1IP1Q9NPC3 277 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms