RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CHRM3P20309 590 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 OXTRP30559 389 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 SLC6A4P31645 630 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 ATP5C1P36542 298 aaKnown RBP14.15□□□□□ -0.14
CD48-201ENST00000368045 CAPGP40121 348 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 PTGER3P43115 390 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 RGRP47804 291 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 SCNN1BP51168 640 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 KCNQ1P51787 676 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 HPCAP84074 193 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 ECT2LQ008S8 904 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 ELAVL2Q12926 359 aaKnown RBP14.15□□□□□ -0.14
CD48-201ENST00000368045 TRAF7Q6Q0C0 670 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 GPR141Q7Z602 305 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 ZFAND4Q86XD8 727 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 HID1Q8IV36 788 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 HOMEZQ8IX15 550 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 CFAP52Q8N1V2 620 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 PDZD8Q8NEN9 1154 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 FAM81AQ8TBF8 368 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 CD200R1Q8TD46 325 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 OVCA2Q8WZ82 227 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 LRRC3Q9BY71 257 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 ELAC1Q9H777 363 aaKnown RBP14.15□□□□□ -0.14
CD48-201ENST00000368045 CD274Q9NZQ7 290 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 ZNF225Q9UK10 706 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 OAZ3Q9UMX2 235 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 TNPO3Q9Y5L0 923 aaKnown RBP14.15□□□□□ -0.14
CD48-201ENST00000368045 ZFP37Q9Y6Q3 630 aaPredicted RBP14.15□□□□□ -0.14
CD48-201ENST00000368045 C9JVG2 144 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 ARNTLO00327 626 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 E2F3O00716 465 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 CLOCKO15516 846 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 BAIAP3O94812 1187 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 VNN2O95498 520 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 RHOCP08134 193 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 CDK4P11802 303 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 PCSK6P29122 969 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 MC4RP32245 332 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 AGTR2P50052 363 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 HK3P52790 923 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 ARPP19P56211 112 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 NUP107P57740 925 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 UFM1P61960 85 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 PRKG2Q13237 762 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 DCTN2Q13561 401 aaKnown RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 PCBP2Q15366 365 aaKnown RBP eCLIP14.14□□□□□ -0.15
CD48-201ENST00000368045 ATP6AP1LQ52LC2 224 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 RABL3Q5HYI8 236 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 PAGE3Q5JUK9 113 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 CTSL3PQ5NE16 218 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 C6orf136Q5SQH8 315 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 DHRS4L2Q6PKH6 230 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 ABRAXAS1Q6UWZ7 409 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 GALNT13Q8IUC8 556 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 ZNF786Q8N393 782 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 DHRSXQ8N5I4 330 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 AADATQ8N5Z0 425 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 TERB1Q8NA31 727 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 LPCAT1Q8NF37 534 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 DNAJB14Q8TBM8 379 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 FAM110BQ8TC76 370 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 VPS33AQ96AX1 596 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 PLD4Q96BZ4 506 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 LINGO1Q96FE5 620 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 SMPD3Q9NY59 655 aaPredicted RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 HSFX1Q9UBD0 423 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 MAGEL2Q9UJ55 1249 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 GABRQQ9UN88 632 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 RAI2Q9Y5P3 530 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 FRMPD3Q5JV73 1810 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 STX7O15400 261 aaKnown RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 SYNCRIPO60506 623 aaKnown RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 TULP3O75386 442 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 C1RP00736 705 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 F11P03951 625 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 SLC10A3P09131 477 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 NELFEP18615 380 aaKnown RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 PRDX3P30048 256 aaKnown RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 FLT3LGP49771 235 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 ZNF177Q13360 481 aaPredicted RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 GPR162Q16538 588 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 NANOGP8Q6NSW7 305 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 RGMBQ6NW40 437 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 RNF19BQ6ZMZ0 732 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 FKBP9P1Q75LS8 142 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 PATL1Q86TB9 770 aaKnown RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 PIANPQ8IYJ0 282 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 KIAA2013Q8IYS2 634 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 TTC30BQ8N4P2 665 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 DRAXINQ8NBI3 349 aaPredicted RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 SIDT2Q8NBJ9 832 aaKnown RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 EEF1AKMT1Q8WVE0 214 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 ISG20Q96AZ6 181 aaKnown RBP14.14□□□□□ -0.15
CD48-201ENST00000368045 TMIGD2Q96BF3 282 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 TEX37Q96LM6 180 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 NSMCE3Q96MG7 304 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 PLEKHG4BQ96PX9 1271 aa14.14□□□□□ -0.15
CD48-201ENST00000368045 SLC30A3Q99726 388 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms