RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NDST2P52849 883 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 SLC12A2P55011 1212 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 DAOAP59103 153 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 YWHAHQ04917 246 aaPredicted RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 GPR17Q13304 367 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 GAS6Q14393 721 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 ACAP2Q15057 778 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 CYTH1Q15438 398 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 TEAD2Q15562 447 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 ZNF829Q3KNS6 432 aaPredicted RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 MAP7D1Q3KQU3 841 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 MTX3Q5HYI7 312 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 TMTC4Q5T4D3 741 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 PM20D1Q6GTS8 502 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 KLHL35Q6PF15 583 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 LINC00299Q6ZSB3 139 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 LARP4Q71RC2 724 aaKnown RBP eCLIP11.45□□□□□ -0.58
USF1-201ENST00000368019 TRIM74Q86UV6 250 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 TRIM73Q86UV7 250 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 LRRC49Q8IUZ0 686 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 SLC41A1Q8IVJ1 513 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 SIX6OS1Q8N1H7 587 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 B3GALNT2Q8NCR0 500 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 PAPD5Q8NDF8 572 aaKnown RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 FATE1Q969F0 183 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 NXNL1Q96CM4 212 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 ATXN7L3BQ96GX2 97 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 IL12RB2Q99665 862 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 OSBPL2Q9H1P3 480 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 CCDC68Q9H2F9 335 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 CAAP1Q9H8G2 361 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 LMAN1LQ9HAT1 526 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 ASAH2Q9NR71 780 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 CHRAC1Q9NRG0 131 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 IGSF5Q9NSI5 407 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 PIGVQ9NUD9 493 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 PIH1D1Q9NWS0 290 aaKnown RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 ACTR3BQ9P1U1 418 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 MAGED2Q9UNF1 606 aaPredicted RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 TIMM13Q9Y5L4 95 aaPredicted RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 PIAS3Q9Y6X2 628 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 KMT2BQ9UMN6 2715 aaPredicted RBP11.45□□□□□ -0.58
USF1-201ENST00000368019 SDK1Q7Z5N4 2213 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 ATG2BQ96BY7 2078 aa11.45□□□□□ -0.58
USF1-201ENST00000368019 CNOT1A5YKK6 2376 aaKnown RBP11.44□□□□□ -0.58
USF1-201ENST00000368019 E2F8A0AVK6 867 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 OR6C75A6NL08 312 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 HEPACAM2A8MVW5 462 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 H0YAE9 185 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 HUS1O60921 280 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 USP12O75317 370 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 VPS4BO75351 444 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 PAPSS2O95340 614 aaPredicted RBP11.44□□□□□ -0.58
USF1-201ENST00000368019 WISP3O95389 354 aaPredicted RBP11.44□□□□□ -0.58
USF1-201ENST00000368019 JUNP05412 331 aaKnown RBP11.44□□□□□ -0.58
USF1-201ENST00000368019 FGF4P08620 206 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 OR4Q2P0C623 313 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 CD1EP15812 388 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 TYMPP19971 482 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 FASP25445 335 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 HOXC13P31276 330 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 CXCR3P49682 368 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 FCHO2Q0JRZ9 810 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 DUSP4Q13115 394 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 SLC36A3Q495N2 470 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 AGKQ53H12 422 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 RAB41Q5JT25 222 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 TIGD7Q6NT04 549 aaPredicted RBP11.44□□□□□ -0.58
USF1-201ENST00000368019 CNSTQ6PJW8 725 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 PAOXQ6QHF9 649 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 PRR23BQ6ZRT6 265 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 CUZD1Q86UP6 607 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 PCDH20Q8N6Y1 951 aaKnown RBP11.44□□□□□ -0.58
USF1-201ENST00000368019 NPWQ8N729 165 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 ACVR1CQ8NER5 493 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 AGR3Q8TD06 166 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 ISOC1Q96CN7 298 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 CENPNQ96H22 339 aaPredicted RBP11.44□□□□□ -0.58
USF1-201ENST00000368019 LRRC3BQ96PB8 259 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 SLC29A1Q99808 456 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 ADI1Q9BV57 179 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 TDRD1Q9BXT4 1180 aaKnown RBP11.44□□□□□ -0.58
USF1-201ENST00000368019 CEP41Q9BYV8 373 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 ARNT2Q9HBZ2 717 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 MAGEE1Q9HCI5 957 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 PARD6AQ9NPB6 346 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 AGPAT4Q9NRZ5 378 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 GID8Q9NWU2 228 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 GTSE1Q9NYZ3 720 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 B3GNT3Q9Y2A9 372 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 SNX13Q9Y5W8 968 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 OBSL1O75147 1896 aa11.44□□□□□ -0.58
USF1-201ENST00000368019 ANKRD36A6QL64 1941 aa11.43□□□□□ -0.58
USF1-201ENST00000368019 A0A1W2PRU2 124 aa11.43□□□□□ -0.58
USF1-201ENST00000368019 TTC24A2A3L6 582 aaPredicted RBP11.43□□□□□ -0.58
USF1-201ENST00000368019 MTMR11A4FU01 709 aa11.43□□□□□ -0.58
USF1-201ENST00000368019 A8MT66 165 aa11.43□□□□□ -0.58
USF1-201ENST00000368019 F5H423 210 aaPredicted RBP11.43□□□□□ -0.58
USF1-201ENST00000368019 GABRDO14764 452 aa11.43□□□□□ -0.58
USF1-201ENST00000368019 RASAL1O95294 804 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms